Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC17Q96LX7 AC012443.1-201ENST00000605605 231 ntBASIC3.7□□□□□ -1.82
CCDC17Q96LX7 AL603758.1-201ENST00000618654 241 ntBASIC3.7□□□□□ -1.82
CCDC17Q96LX7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC17Q96LX7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC17Q96LX7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC17Q96LX7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC17Q96LX7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 MTND4P35-201ENST00000604257 1375 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 RNU6-552P-201ENST00000362869 119 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 SNORD115-7-201ENST00000365306 82 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 RNU6-61P-201ENST00000365528 109 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 SNORA32.2-201ENST00000384049 122 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 Y_RNA.535-201ENST00000384612 99 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 RNU4-65P-201ENST00000410473 140 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 RN7SKP220-201ENST00000410611 288 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 RPL30P2-201ENST00000414021 291 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 RPL35AP12-201ENST00000425362 338 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AC090774.1-201ENST00000435925 246 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AL162389.1-201ENST00000449233 177 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 HMGN2P26-201ENST00000463169 339 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AL049830.2-201ENST00000480072 201 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 TTC39CP1-201ENST00000512513 755 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 Vault.1-201ENST00000516474 102 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 RNU6-1092P-201ENST00000516955 87 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AL121603.1-201ENST00000553815 142 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 MIR4424-201ENST00000585257 86 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 IGHV3-29-201ENST00000604817 344 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AC021646.1-201ENST00000605469 484 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AC087045.1-201ENST00000605856 382 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 U73479.1-201ENST00000618062 168 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AC009248.2-201ENST00000619826 254 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 AC006065.5-201ENST00000623427 349 ntBASIC3.69□□□□□ -1.82
CCDC17Q96LX7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC17Q96LX7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 RNA5SP167-201ENST00000365461 116 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 SMIM11P1-201ENST00000369586 178 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 RNU6-356P-201ENST00000384140 107 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 MIR514A2-201ENST00000385131 88 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 MIR514A3-201ENST00000385132 88 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AL122016.1-201ENST00000403365 367 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AC099677.1-201ENST00000420575 175 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 MTND1P18-201ENST00000448191 573 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 SNORD97-201ENST00000459187 142 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 FGF7P4-201ENST00000509595 295 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 RNU4-29P-201ENST00000515943 174 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 RNU7-30P-201ENST00000516835 62 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 BTF3P12-201ENST00000519620 469 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 HMGN1P28-201ENST00000521340 364 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AC100870.1-201ENST00000522035 505 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AC078814.3-201ENST00000553036 491 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 MIR4703-201ENST00000577728 79 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AC093732.2-201ENST00000607950 274 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AL132765.2-201ENST00000610812 351 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 AL121757.2-201ENST00000611223 313 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 MIR6130-201ENST00000619419 109 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 TAB3P1-202ENST00000452645 1634 ntBASIC3.68□□□□□ -1.82
CCDC17Q96LX7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC17Q96LX7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RNU6-1284P-201ENST00000363701 100 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RNU4-76P-201ENST00000364509 141 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RNU6-629P-201ENST00000384061 103 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 Y_RNA.576-201ENST00000384781 102 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AL359634.1-202ENST00000404721 284 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RNU6-193P-201ENST00000410977 107 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC007390.1-201ENST00000415722 356 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AL645937.1-202ENST00000421799 937 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 PPP1R11P2-201ENST00000423543 382 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 RPL7L1P10-201ENST00000427790 463 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC17Q96LX7 AC004866.2-201ENST00000438285 481 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 MTCO3P45-201ENST00000443036 613 ntBASIC3.67□□□□□ -1.82
CCDC17Q96LX7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms