Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MTND4P7-201ENST00000523876 130 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 PSMA2P1-201ENST00000526365 646 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AC034105.4-201ENST00000568304 277 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 uc_338.34-201ENST00000617467 174 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 MIR6076-201ENST00000617521 113 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AC092794.2-201ENST00000620933 563 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AC009093.8-201ENST00000641769 292 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDK5RAP3Q96JB5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CDK5RAP3Q96JB5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CDK5RAP3Q96JB5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-1167P-201ENST00000363227 94 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.157-201ENST00000363638 102 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 Y_RNA.231-201ENST00000364358 102 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-38P-201ENST00000384085 107 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 MIR200C-201ENST00000384980 68 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 MIR218-2-201ENST00000385006 110 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 PTMAP2-201ENST00000397627 327 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AL139039.1-201ENST00000401900 692 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-1077P-201ENST00000410506 102 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RPS29P4-201ENST00000414733 161 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AC080125.1-201ENST00000414888 684 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RPL21P111-201ENST00000418453 477 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 GOT2P5-201ENST00000433995 546 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AC104058.1-201ENST00000448028 297 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-333P-201ENST00000459117 107 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RPS20P22-201ENST00000473700 357 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RPL30P14-201ENST00000482744 348 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AC098799.2-201ENST00000509466 868 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-711P-201ENST00000517255 106 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AC026403.1-201ENST00000518938 295 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 MIR5583-1-201ENST00000580941 59 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 MIR4424-201ENST00000585257 86 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AC098826.3-201ENST00000603823 466 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 MIR15A-201ENST00000607334 83 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AL357559.1-201ENST00000622228 274 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AC012442.3-202ENST00000636742 206 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 AC093908.1-201ENST00000623125 8092 ntBASIC3.9□□□□□ -1.79
CDK5RAP3Q96JB5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 BX323014.1-201ENST00000412876 237 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 SYF2P2-201ENST00000417620 583 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 SRIP2-201ENST00000428470 166 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 ERLEC1P1-201ENST00000433806 578 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AC009237.8-201ENST00000445492 379 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 MTND5P20-201ENST00000448677 143 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 RPL23AP11-201ENST00000475260 469 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AC026784.1-201ENST00000507986 352 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AC114786.4-201ENST00000508771 728 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 APOOP4-201ENST00000513530 597 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-914P-201ENST00000516749 109 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AL137161.1-201ENST00000532231 390 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AC006557.5-201ENST00000603126 811 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 BNIP3P9-201ENST00000603714 553 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-89P-201ENST00000606519 100 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 RNVU1-4-201ENST00000612985 164 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AP003122.6-201ENST00000623831 495 ntBASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDK5RAP3Q96JB5 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 SNORA1.3-201ENST00000384676 136 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 MIR514A2-201ENST00000385131 88 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 MIR514A3-201ENST00000385132 88 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 RNU6-1197P-201ENST00000391183 107 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 RNA5SP38-201ENST00000410750 119 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AL160275.3-201ENST00000423876 471 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AL513185.2-201ENST00000425543 193 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AL592045.1-201ENST00000429867 352 ntBASIC3.88□□□□□ -1.79
CDK5RAP3Q96JB5 AC092573.2-201ENST00000434546 243 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms