Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 GNG5P1-201ENST00000255500 204 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 U8.3-201ENST00000363321 132 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RNU6-884P-201ENST00000363889 107 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RNU1-73P-201ENST00000383971 164 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 SNORA80E-201ENST00000384744 137 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RNU6-248P-201ENST00000410720 107 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RNU2-68P-201ENST00000410878 191 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC090960.1-201ENST00000421072 306 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 GTF2IP20-201ENST00000431663 360 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 GPM6BP2-201ENST00000432046 144 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC009961.2-201ENST00000435771 251 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RPS12P2-201ENST00000439728 269 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 GPM6BP1-201ENST00000446387 144 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 NIPA2P5-201ENST00000452282 464 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 CECR9-201ENST00000453421 199 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RPL26P9-201ENST00000457466 433 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RPL37P6-201ENST00000460682 294 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 MTND1P3-201ENST00000484956 952 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC007182.2-201ENST00000489251 402 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RPS27AP10-201ENST00000496103 208 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 HMGB3P3-201ENST00000510526 400 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC010486.3-201ENST00000511602 785 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RNU2-46P-201ENST00000517038 113 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 IGLV3-17-201ENST00000519099 244 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC060788.1-201ENST00000521318 469 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AP003122.3-201ENST00000526316 255 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC084851.1-201ENST00000529105 249 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 OR5BN1P-201ENST00000532955 829 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 NACAP3-201ENST00000552100 481 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 MTND3P12-201ENST00000559068 328 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 MIR4429-201ENST00000580105 73 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 MIR548AB-201ENST00000584917 84 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC005771.1-201ENST00000585581 349 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 Z99497.2-201ENST00000603634 310 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AP001506.1-201ENST00000615444 211 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 AC091931.1-201ENST00000623488 728 ntBASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RPUSD4Q96CM3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC073343.1-201ENST00000328239 651 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 MIR422A-201ENST00000362286 90 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 SNORD56.2-201ENST00000363242 71 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 RNY3P9-201ENST00000384727 106 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 MIR558-201ENST00000384920 94 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 RNA5SP210-201ENST00000391034 120 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC023141.4-201ENST00000412031 328 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 RPS12P24-201ENST00000412619 387 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 MED13P1-201ENST00000428342 171 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC098826.1-201ENST00000433943 471 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC119618.1-201ENST00000434191 222 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 MTND1P26-201ENST00000440488 538 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AL358232.1-201ENST00000448030 501 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 RPL37P4-201ENST00000448908 268 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC011753.1-201ENST00000451001 220 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AL033528.1-201ENST00000453780 140 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 snoU109.1-201ENST00000459339 135 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 RPS27P27-201ENST00000498779 255 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC083906.5-201ENST00000503722 328 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 SUMO2P6-201ENST00000505273 288 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 RNA5SP165-201ENST00000517142 115 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC025281.1-201ENST00000567026 265 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 MIR5092-201ENST00000583139 88 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 HMGN2P15-201ENST00000585707 270 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 NRBF2P1-201ENST00000587407 859 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AL590229.1-201ENST00000603497 542 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 PISRT1-201ENST00000626175 531 ntBASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
RPUSD4Q96CM3 FARSBP1-201ENST00000435808 1778 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms