Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AL121821.2-201ENST00000556081 394 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.27□□□□□ -1.89
SKA1Q96BD8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.27□□□□□ -1.89
SKA1Q96BD8 MIR3167-201ENST00000579623 85 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 AL391813.1-201ENST00000603098 260 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 AC007938.3-201ENST00000604965 623 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 AL158032.1-201ENST00000605401 106 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 AL139286.2-201ENST00000606838 396 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.27□□□□□ -1.89
SKA1Q96BD8 AC073114.1-201ENST00000612027 490 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 AC008147.4-201ENST00000617570 1204 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 MIR3974-201ENST00000637126 96 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SKA1Q96BD8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
SKA1Q96BD8 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.27□□□□□ -1.89
SKA1Q96BD8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SKA1Q96BD8 AC004520.1-201ENST00000608362 1413 ntBASIC3.27□□□□□ -1.89
SKA1Q96BD8 AC004944.1-201ENST00000517807 3059 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 Y_RNA.33-201ENST00000362591 102 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 RNU6-395P-201ENST00000365662 106 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SKA1Q96BD8 RNU6-1025P-201ENST00000410629 104 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 ISCA1P6-201ENST00000427740 390 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC009961.2-201ENST00000435771 251 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 Z75741.1-201ENST00000446793 314 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 NANOGNBP1-201ENST00000448444 480 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC233279.1-201ENST00000455300 423 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 GZMAP1-201ENST00000503054 631 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC119751.5-201ENST00000514077 770 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 SCARNA17.1-201ENST00000516211 143 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 SCARNA17.2-201ENST00000516334 143 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC009902.1-201ENST00000519351 183 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC012414.6-201ENST00000568241 401 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 LARP7P3-201ENST00000579888 337 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC078899.3-201ENST00000599065 212 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 SEPT7P9-203ENST00000604116 343 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 AC135507.1-201ENST00000607214 561 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 SCARNA17.4-201ENST00000614296 143 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.26□□□□□ -1.89
SKA1Q96BD8 CU459211.1-201ENST00000635667 749 ntBASIC3.26□□□□□ -1.89
SKA1Q96BD8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SKA1Q96BD8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SKA1Q96BD8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SKA1Q96BD8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SKA1Q96BD8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 OR5J1P-201ENST00000313544 939 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SKA1Q96BD8 RNA5SP197-201ENST00000363357 119 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 U8.9-201ENST00000365667 134 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 SET-203ENST00000372688 801 ntTSL 2 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 AL356057.2-201ENST00000403318 432 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 RNU2-25P-201ENST00000411041 191 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 RPL32P35-201ENST00000415214 394 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC090960.1-201ENST00000421072 306 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC007560.1-201ENST00000426912 237 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC092427.1-202ENST00000430569 476 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC098826.1-201ENST00000433943 471 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 CST9LP2-201ENST00000437612 320 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 GAPDHP17-201ENST00000449858 1001 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC010486.3-201ENST00000511602 785 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 SNORA31.19-201ENST00000517079 126 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 RN7SKP40-201ENST00000517211 242 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC090136.1-201ENST00000520009 240 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 LINC00933-203ENST00000559812 219 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 MIR4513-201ENST00000581077 86 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC025811.1-201ENST00000604312 472 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC012409.4-201ENST00000612923 249 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC138932.5-201ENST00000617759 563 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SKA1Q96BD8 AC010329.5-201ENST00000623497 2174 ntBASIC3.25□□□□□ -1.89
SKA1Q96BD8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SKA1Q96BD8 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SKA1Q96BD8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SKA1Q96BD8 RNU6-19P-201ENST00000384718 107 ntBASIC3.24□□□□□ -1.89
SKA1Q96BD8 SNORA46-201ENST00000384762 135 ntBASIC3.24□□□□□ -1.89
SKA1Q96BD8 RPL21P75-201ENST00000396599 483 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms