Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC097713.2-201ENST00000430199 356 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 RPL36P19-201ENST00000430744 301 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 RPS6P12-201ENST00000432491 726 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 MTATP6P16-201ENST00000434543 526 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC005019.1-201ENST00000436455 431 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 PCNPP5-201ENST00000452246 481 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 GSTA11P-201ENST00000452866 669 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 HMGB3P30-201ENST00000457863 606 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC055855.1-201ENST00000489563 579 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 RPL22P13-201ENST00000493291 347 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC015911.1-201ENST00000495111 156 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 RPS27P27-201ENST00000498779 255 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 RPL39P5-202ENST00000512505 151 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC018797.3-201ENST00000513388 1241 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC016065.2-201ENST00000514530 444 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 Vault.1-201ENST00000516474 102 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.721-201ENST00000517207 102 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC090136.1-201ENST00000520009 240 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 IGLVIV-53-201ENST00000520107 367 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC006077.1-201ENST00000604746 343 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 U73479.1-201ENST00000618062 168 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AL669831.3-213ENST00000636676 183 ntBASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.28□□□□□ -1.72
SH3RF3Q8TEJ3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 XIAPP3-201ENST00000312918 795 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 RNA5SP50-201ENST00000363731 107 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 RNA5SP72-201ENST00000364442 117 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 UBE2V1P2-201ENST00000397758 440 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AC017079.2-201ENST00000416102 485 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 SDAD1P3-201ENST00000427380 333 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AC104057.1-201ENST00000515547 497 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-408P-201ENST00000515910 100 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 RN7SKP209-201ENST00000516888 304 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AP000889.1-201ENST00000530968 660 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 MIR5583-1-201ENST00000580941 59 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AC100812.1-201ENST00000607622 580 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 Z82243.1-201ENST00000609432 473 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AC006157.1-201ENST00000611750 366 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AL355810.1-201ENST00000614629 552 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 PLCE1P1-201ENST00000622094 305 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 AL732372.2-225ENST00000642124 456 ntBASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SH3RF3Q8TEJ3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 RNU4-35P-201ENST00000362588 141 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-266P-201ENST00000364225 107 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-890P-201ENST00000384121 107 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 ARL5AP1-201ENST00000418991 388 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 ATG3P1-201ENST00000419507 911 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 BX842559.1-201ENST00000419615 532 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 DPH3P2-201ENST00000422618 250 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 HMGB1P15-201ENST00000453854 435 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 RNU6-256P-201ENST00000516747 97 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 AC128657.1-201ENST00000549459 145 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 AC007375.1-201ENST00000554513 578 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 BNIP3P16-201ENST00000589779 534 ntBASIC4.26□□□□□ -1.73
SH3RF3Q8TEJ3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms