Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 AC098826.3-201ENST00000603823 466 ntBASIC4.13□□□□□ -1.75
SH3RF2Q8TEC5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SH3RF2Q8TEC5 FP236240.3-201ENST00000623061 327 ntBASIC4.13□□□□□ -1.75
SH3RF2Q8TEC5 AC092608.2-201ENST00000624427 218 ntBASIC4.13□□□□□ -1.75
SH3RF2Q8TEC5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.13□□□□□ -1.75
SH3RF2Q8TEC5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SH3RF2Q8TEC5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SH3RF2Q8TEC5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
SH3RF2Q8TEC5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SH3RF2Q8TEC5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 RNU6-490P-201ENST00000362985 107 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 RNA5SP399-201ENST00000364003 117 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 RNU6-512P-201ENST00000364438 103 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 RNU6-1329P-201ENST00000365664 107 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 RNU6-1032P-201ENST00000384100 107 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 RNU6-1179P-201ENST00000384667 107 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 snoU13.4-201ENST00000458916 104 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 PPIAP15-201ENST00000479662 484 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 AC006499.6-201ENST00000511169 607 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 PTP4A1P4-201ENST00000512479 322 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 SNORA25.10-201ENST00000515926 124 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 AC069240.1-201ENST00000548774 375 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 MED28P6-201ENST00000558776 231 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 MIR3671-201ENST00000580455 88 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 OR1M4P-201ENST00000589199 287 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 RNU6-85P-201ENST00000605989 107 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 AL355810.1-201ENST00000614629 552 ntBASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SH3RF2Q8TEC5 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AC138393.1-203ENST00000327086 343 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 Y_RNA.33-201ENST00000362591 102 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 Y_RNA.148-201ENST00000363557 117 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 Y_RNA.158-201ENST00000363651 101 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 Y_RNA.404-201ENST00000383978 102 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 Y_RNA.463-201ENST00000384271 102 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 MCFD2P1-201ENST00000417812 300 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 NDUFB4P7-201ENST00000423198 363 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 HMGB1P9-201ENST00000429856 646 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AC097713.2-201ENST00000430199 356 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 GOT2P5-201ENST00000433995 546 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AL133547.1-201ENST00000448546 220 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 RN7SL585P-201ENST00000470538 280 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AC006517.1-201ENST00000480485 328 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AL160314.1-201ENST00000490836 438 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 RNU6-470P-201ENST00000515954 104 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 RNA5SP471-201ENST00000516971 106 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 CYCSP30-201ENST00000546447 172 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 YPEL5P3-201ENST00000547227 352 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 MIR4444-1-201ENST00000581696 74 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 MIR4444-2-201ENST00000584390 74 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AL161798.1-201ENST00000604630 131 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AC007938.3-201ENST00000604965 623 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 AC067931.1-201ENST00000624190 671 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 MARK2P15-201ENST00000432204 2186 ntBASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SH3RF2Q8TEC5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SH3RF2Q8TEC5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.1□□□□□ -1.75
SH3RF2Q8TEC5 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
SH3RF2Q8TEC5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.1□□□□□ -1.75
SH3RF2Q8TEC5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SH3RF2Q8TEC5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms