Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 RPL31P13-201ENST00000484151 370 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 HMGN1P13-201ENST00000505795 138 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AL359273.1-201ENST00000510918 627 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 APOOP4-201ENST00000513530 597 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 RNU6-914P-201ENST00000516749 109 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 Y_RNA.701-201ENST00000516812 110 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 RNU6-1088P-201ENST00000516850 104 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 KLKP1-201ENST00000595979 403 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 DUSP12P1-201ENST00000612874 516 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 uc_338.15-201ENST00000615470 191 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AC007742.2-201ENST00000618226 398 ntBASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CCHCR1Q8TD31 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CCHCR1Q8TD31 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
CCHCR1Q8TD31 MTND4P23-201ENST00000447723 1363 ntBASIC3.9□□□□□ -1.78
CCHCR1Q8TD31 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCHCR1Q8TD31 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.9□□□□□ -1.78
CCHCR1Q8TD31 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.9□□□□□ -1.78
CCHCR1Q8TD31 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
CCHCR1Q8TD31 Y_RNA.339-201ENST00000365325 102 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 RNU6-213P-201ENST00000384051 104 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 RNA5SP219-201ENST00000390940 113 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 FAT1P1-201ENST00000406588 507 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC091390.3-201ENST00000426478 338 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC006989.1-201ENST00000427212 131 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 RPL7P43-201ENST00000478876 753 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 RNU6-1073P-201ENST00000517182 106 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 RANP9-201ENST00000519957 271 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AP000763.2-201ENST00000540641 163 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 CYCSP30-201ENST00000546447 172 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 MIR4738-201ENST00000579134 87 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC116096.1-201ENST00000566804 2314 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 AC091152.2-201ENST00000591628 2569 ntBASIC3.9□□□□□ -1.79
CCHCR1Q8TD31 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 Y_RNA.67-201ENST00000362870 100 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 RNA5SP515-201ENST00000364570 118 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 MIR607-201ENST00000385241 96 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 SNORA3.3-201ENST00000408712 125 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 MIR1290-201ENST00000408735 78 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 SNORA57.3-201ENST00000411095 141 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 Z85995.1-201ENST00000415547 335 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 AC016831.2-201ENST00000417179 352 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 RPS24P13-201ENST00000442520 397 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 RPL21P41-201ENST00000459863 264 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 RPL37P6-201ENST00000460682 294 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 RPS20P22-201ENST00000473700 357 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 AP002812.1-201ENST00000495378 474 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 AC009901.1-201ENST00000506703 541 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 RAC1P2-201ENST00000511164 579 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 SNORA14.1-201ENST00000516113 141 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 MIR3941-201ENST00000582572 103 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 AC090132.2-201ENST00000615881 347 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 AL160413.1-201ENST00000622780 310 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 AC022418.1-201ENST00000624118 445 ntBASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCHCR1Q8TD31 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.88□□□□□ -1.79
CCHCR1Q8TD31 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms