Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC093331.1-201ENST00000521474 169 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 TPRKBP2-201ENST00000565969 475 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC098848.2-201ENST00000588023 330 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC025449.1-201ENST00000603896 529 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC007363.1-201ENST00000604736 620 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC116312.1-201ENST00000606841 314 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC026585.1-201ENST00000619582 524 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC124864.2-201ENST00000624736 186 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 IGHVIII-44-202ENST00000636235 289 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC068137.3-201ENST00000639191 341 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC073869.6-201ENST00000640656 341 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC01006Q8NI28 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.28□□□□□ -2.04
LINC01006Q8NI28 AC008568.2-201ENST00000623862 2313 ntBASIC2.28□□□□□ -2.05
LINC01006Q8NI28 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
LINC01006Q8NI28 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
LINC01006Q8NI28 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 SDAD1P2-201ENST00000441308 2028 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RNU6-108P-201ENST00000365558 107 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 Y_RNA.554-201ENST00000384672 102 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 MTCO3P40-201ENST00000392516 676 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RPS4XP8-201ENST00000402039 771 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 FAT1P1-201ENST00000406588 507 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 MIR548F1-201ENST00000408667 84 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 Z85995.1-201ENST00000415547 335 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC114491.1-201ENST00000416095 246 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RAC1P6-201ENST00000423911 575 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 MED13P1-201ENST00000428342 171 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 OR2B8P-201ENST00000432841 938 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 HMGB3P12-201ENST00000438745 556 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC092473.1-201ENST00000441098 221 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RPL37P4-201ENST00000448908 268 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 SNORD97-201ENST00000459187 142 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RPS20P20-201ENST00000460498 340 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RPL7P5-201ENST00000471472 736 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RN7SL442P-201ENST00000473804 320 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC023194.1-201ENST00000493084 308 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RNU1-143P-201ENST00000516296 146 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 SCARNA15.2-201ENST00000516409 127 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RNU6-314P-201ENST00000516574 104 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AP003072.2-201ENST00000527756 676 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AP001646.1-201ENST00000527936 915 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 OR5B19P-201ENST00000531766 928 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AL163153.1-201ENST00000554223 283 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC024619.4-201ENST00000580924 316 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC008962.1-201ENST00000605729 304 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC126118.1-201ENST00000607744 628 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC107294.1-201ENST00000609524 467 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 U1.23-201ENST00000610293 146 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 RNU1-68P-201ENST00000615382 146 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 U1.39-201ENST00000621562 146 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AL359880.1-201ENST00000621879 266 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AC093648.1-201ENST00000623546 606 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.27□□□□□ -2.05
LINC01006Q8NI28 SRP72P2-201ENST00000344851 1979 ntBASIC2.27□□□□□ -2.05
LINC01006Q8NI28 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 OR4G2P-201ENST00000328113 903 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 RNU6-14P-201ENST00000384630 106 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 SNORA1.3-201ENST00000384676 136 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 EI24P2-201ENST00000397776 1076 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AL445529.1-201ENST00000398713 389 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 RNU6-1077P-201ENST00000410506 102 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 RNU2-39P-201ENST00000410604 198 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 RN7SKP284-201ENST00000411002 343 ntBASIC2.26□□□□□ -2.05
LINC01006Q8NI28 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LINC01006Q8NI28 AC092809.3-201ENST00000415453 231 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms