Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC103591.3-201ENST00000608684 209 ntBASIC2.83□□□□□ -1.96
RTL3Q8N8U3 AC013562.2-201ENST00000611632 603 ntBASIC2.83□□□□□ -1.96
RTL3Q8N8U3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
RTL3Q8N8U3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.83□□□□□ -1.96
RTL3Q8N8U3 AC006386.2-201ENST00000624491 75 ntBASIC2.83□□□□□ -1.96
RTL3Q8N8U3 AC012005.1-201ENST00000624575 75 ntBASIC2.83□□□□□ -1.96
RTL3Q8N8U3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.83□□□□□ -1.96
RTL3Q8N8U3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RTL3Q8N8U3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.83□□□□□ -1.96
RTL3Q8N8U3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RTL3Q8N8U3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 RNU5F-7P-201ENST00000363696 115 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 RNU6-1284P-201ENST00000363701 100 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 RNU6-533P-201ENST00000384144 107 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 RNU6-809P-201ENST00000384461 107 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 Y_RNA.559-201ENST00000384686 107 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 MIR181B1-201ENST00000385240 110 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 Y_RNA.598-201ENST00000410480 95 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 RNU2-16P-201ENST00000410712 136 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 RNA5SP21-201ENST00000410917 96 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL663109.1-201ENST00000411498 844 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC078974.1-201ENST00000411597 223 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL592148.1-201ENST00000413568 445 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL022238.1-201ENST00000442557 355 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 MTATP6P30-201ENST00000443540 664 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 USP9YP12-201ENST00000450481 570 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL590365.1-201ENST00000450788 243 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 CECR9-201ENST00000453421 199 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 RN7SKP40-201ENST00000517211 242 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 MTND4LP18-201ENST00000526864 291 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC007536.1-201ENST00000533382 349 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 NACAP3-201ENST00000552100 481 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL359212.1-201ENST00000556608 614 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC012213.3-201ENST00000577199 777 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 ELOCP29-201ENST00000588193 334 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 NRBF2P5-201ENST00000603087 788 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL136363.2-201ENST00000604173 851 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC008277.2-201ENST00000605196 797 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC005046.1-201ENST00000608515 625 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 OR10AB1P-201ENST00000609613 938 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AC098679.4-201ENST00000624241 654 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL136313.1-201ENST00000624804 202 ntBASIC2.82□□□□□ -1.96
RTL3Q8N8U3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.82□□□□□ -1.96
RTL3Q8N8U3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 SNORA80A-201ENST00000363922 136 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 SNORA68.1-201ENST00000364537 132 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 RNU4-75P-201ENST00000364621 146 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 SET-203ENST00000372688 801 ntTSL 2 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 OR5H15-201ENST00000383696 930 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 RNU2-68P-201ENST00000410878 191 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AL353777.1-201ENST00000425552 326 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 HMGB1P9-201ENST00000429856 646 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC112220.1-201ENST00000434628 355 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 RPS15AP7-201ENST00000439294 405 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 RPL21P2-201ENST00000440049 481 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC025750.2-201ENST00000442609 450 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 DPPA3P1-201ENST00000448050 469 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 TPT1P7-201ENST00000458300 517 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AP003467.2-201ENST00000520175 319 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AP003122.4-201ENST00000530980 758 ntBASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.81□□□□□ -1.96
RTL3Q8N8U3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms