Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AC233702.9-201ENST00000581528 203 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AC012468.1-201ENST00000604888 430 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 USP8P1-201ENST00000494673 3183 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 LINC01355-201ENST00000566551 5444 ntBASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.92□□□□□ -1.62
DEPDC4Q8N2C3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 RNU5B-2P-201ENST00000363036 113 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-662P-201ENST00000384253 104 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 RNU6-102P-201ENST00000384485 104 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 MTHFD2P2-201ENST00000407725 247 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 RNU5A-5P-201ENST00000411054 116 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AL133173.1-201ENST00000423458 397 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC005002.2-201ENST00000438228 269 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC096638.1-201ENST00000444678 216 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 NDUFB4P10-201ENST00000452541 359 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AP000870.1-201ENST00000472927 406 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC231760.1-201ENST00000498002 260 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 RN7SKP49-201ENST00000516675 260 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 MIR4643-201ENST00000577473 78 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 MIR4423-201ENST00000580922 80 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC012603.1-201ENST00000606424 528 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AC118658.2-201ENST00000618697 459 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 AL023881.1-201ENST00000621088 301 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 U2.22-201ENST00000636441 106 ntBASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.91□□□□□ -1.62
DEPDC4Q8N2C3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
DEPDC4Q8N2C3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.9□□□□□ -1.62
DEPDC4Q8N2C3 AC090740.1-201ENST00000623193 2262 ntBASIC4.9□□□□□ -1.62
DEPDC4Q8N2C3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.9□□□□□ -1.62
DEPDC4Q8N2C3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
DEPDC4Q8N2C3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
DEPDC4Q8N2C3 AC126323.6-202ENST00000568092 3511 ntBASIC4.9□□□□□ -1.62
DEPDC4Q8N2C3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
DEPDC4Q8N2C3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 SNORA73.1-201ENST00000363107 205 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 Y_RNA.199-201ENST00000364014 102 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-879P-201ENST00000364328 108 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 RNA5SP189-201ENST00000364920 115 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 RNA5SP131-201ENST00000365452 119 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 SNORA29-201ENST00000384183 140 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 PCNPP3-201ENST00000393579 471 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 SPTLC1P2-201ENST00000407089 121 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 NDUFS5P4-201ENST00000412983 318 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AC017079.2-201ENST00000416102 485 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 VDAC1P3-201ENST00000434069 851 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 RNU7-120P-201ENST00000459334 63 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AC108043.1-201ENST00000512696 574 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 RNA5SP468-201ENST00000516782 93 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-1198P-201ENST00000516904 67 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 RNU6-1212P-201ENST00000517023 104 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 MRPS21P7-201ENST00000566937 238 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AP005403.1-201ENST00000579720 229 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 RN7SL356P-201ENST00000582228 248 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 BX005214.3-202ENST00000619809 325 ntBASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
DEPDC4Q8N2C3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.89□□□□□ -1.63
DEPDC4Q8N2C3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms