Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
C9orf40Q8IXQ3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.4□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-799P-201ENST00000363567 107 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 SNORA25.6-201ENST00000364121 118 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 RNU5E-6P-201ENST00000365574 115 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 RPL23AP32-201ENST00000395315 459 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AL139397.2-201ENST00000404529 772 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 MIR1302-8-201ENST00000408342 128 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 MIR1289-1-201ENST00000408836 144 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 RNU2-8P-201ENST00000410727 190 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 RN7SKP142-201ENST00000411236 328 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC104651.1-201ENST00000427559 735 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 USP9YP15-201ENST00000442391 422 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC009961.3-201ENST00000449832 765 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AL033528.1-201ENST00000453780 140 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AP000705.1-201ENST00000454567 350 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC092798.1-201ENST00000458542 409 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 snoU109.1-201ENST00000459339 135 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 MTND4LP3-201ENST00000468320 276 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 SRIP1-201ENST00000489235 288 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 RNA5SP471-201ENST00000516971 106 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 RNU2-46P-201ENST00000517038 113 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 HMGB1P41-201ENST00000520234 440 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC110760.3-201ENST00000598794 467 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC098826.3-201ENST00000603823 466 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AP000787.2-201ENST00000604432 568 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC091304.9-201ENST00000612091 226 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AL158063.1-201ENST00000615349 536 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 MIR6852-201ENST00000621699 66 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 Z69908.1-201ENST00000622603 247 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC103988.1-201ENST00000566382 2177 ntBASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
C9orf40Q8IXQ3 UBE2L2-201ENST00000254302 429 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 RNY4P34-201ENST00000364779 95 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 SMIM11P1-201ENST00000369586 178 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-14P-201ENST00000384630 106 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 RNA5SP210-201ENST00000391034 120 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 RPS4XP8-201ENST00000402039 771 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 HMGN2P35-201ENST00000412164 270 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 USP9YP20-201ENST00000419224 558 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 ELOCP4-201ENST00000420090 333 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 ARPC3P1-201ENST00000437218 533 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AL714022.1-201ENST00000439897 151 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 RPL12P25-201ENST00000455592 494 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 RPS3P1-201ENST00000456781 192 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AIG1P1-201ENST00000503376 148 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 NDUFB4P2-201ENST00000509515 391 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 RNU4-29P-201ENST00000515943 174 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 RNU7-51P-201ENST00000516560 62 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 Y_RNA.695-201ENST00000516715 107 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-1092P-201ENST00000516955 87 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AP002453.2-201ENST00000533503 320 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AC005771.1-201ENST00000585581 349 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AC010620.1-201ENST00000601088 1102 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AL161798.1-201ENST00000604630 131 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AC007363.1-201ENST00000604736 620 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AL451064.1-201ENST00000607718 471 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AP001506.1-201ENST00000615444 211 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AC091564.4-201ENST00000533934 2194 ntBASIC2.39□□□□□ -2.03
C9orf40Q8IXQ3 AL136360.1-201ENST00000503377 1900 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 MTND5P29-201ENST00000458676 1807 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 HSPE1P11-201ENST00000339579 310 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 SNORD56.2-201ENST00000363242 71 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 U8.3-201ENST00000363321 132 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-512P-201ENST00000364438 103 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 ELOCP14-201ENST00000428070 331 ntBASIC2.38□□□□□ -2.03
C9orf40Q8IXQ3 AC093106.2-201ENST00000428212 385 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms