Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 MIR5007-201ENST00000583098 95 ntBASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 AC002984.1-201ENST00000591692 448 ntBASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 AC005261.5-201ENST00000596280 355 ntBASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 AC105148.1-201ENST00000604961 409 ntBASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 AC108747.1-201ENST00000609508 535 ntBASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 AC009159.1-201ENST00000618386 642 ntBASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 CU459211.1-201ENST00000635667 749 ntBASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 ELF2P3-201ENST00000445099 1506 ntBASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CCDC50Q8IVM0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 Y_RNA.46-201ENST00000362695 102 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 RNU5A-8P-201ENST00000364102 114 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 U3.12-201ENST00000364498 214 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 RNU6-701P-201ENST00000384059 107 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 RNU1-52P-201ENST00000384190 164 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 RNU6-14P-201ENST00000384630 106 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 NDUFS5P1-201ENST00000405668 289 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 AC107081.1-201ENST00000414975 361 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 SNORA31.6-201ENST00000516241 130 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 AP006587.4-201ENST00000526053 529 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 MIR4999-201ENST00000585029 91 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 APOOP1-201ENST00000604695 592 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 AC026790.2-201ENST00000606282 430 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 HMGB1P24-202ENST00000615653 685 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 MTND5P29-201ENST00000458676 1807 ntBASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC50Q8IVM0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC010889.1-201ENST00000566193 2666 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AL391994.1-201ENST00000254724 282 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 RNA5SP289-201ENST00000362332 137 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 RN7SKP226-201ENST00000364912 300 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 RNU2-68P-201ENST00000410878 191 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 MTCO3P30-201ENST00000426425 670 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 GPM6BP2-201ENST00000432046 144 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 RPL36AP53-201ENST00000432891 316 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 TIMM9P1-201ENST00000436122 256 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 UBE2FP3-201ENST00000436366 524 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 GPM6BP1-201ENST00000446387 144 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 FABP5P15-201ENST00000453566 214 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC233279.1-201ENST00000455300 423 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 ANKRD26P4-201ENST00000455755 950 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC090515.1-201ENST00000465295 476 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC034244.1-201ENST00000507687 207 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC114781.4-201ENST00000513707 639 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 SNORA31.3-201ENST00000516029 96 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 MTATP6P15-201ENST00000527233 835 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AP001646.1-201ENST00000527936 915 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC123904.2-201ENST00000548059 300 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AL356432.3-201ENST00000568952 465 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 OR10AB1P-201ENST00000609613 938 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AL031667.3-201ENST00000620124 655 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 CTSLP2-204ENST00000629029 392 ntBASIC2.34□□□□□ -2.03
CCDC50Q8IVM0 AC110491.1-201ENST00000562191 2010 ntBASIC2.34□□□□□ -2.04
CCDC50Q8IVM0 Y_RNA.97-201ENST00000363094 102 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 RNU6-278P-201ENST00000390945 109 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 RPS20P2-201ENST00000402520 389 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 HMGB1P49-201ENST00000418882 569 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 Z80107.1-201ENST00000436830 412 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 GDI2P2-201ENST00000445131 608 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 IFNA11P-201ENST00000446352 526 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 RNU6-415P-201ENST00000516252 97 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 MRPS36P3-201ENST00000519284 130 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC023050.2-201ENST00000544968 387 ntBASIC2.33□□□□□ -2.04
CCDC50Q8IVM0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms