Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
UBR3Q6ZT12 TATDN1P1-201ENST00000414123 891 ntBASIC0.87□□□□□ -2.27
UBR3Q6ZT12 RPL30P13-201ENST00000418873 348 ntBASIC0.87□□□□□ -2.27
UBR3Q6ZT12 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.87□□□□□ -2.27
UBR3Q6ZT12 AC117454.1-201ENST00000491120 168 ntBASIC0.87□□□□□ -2.27
UBR3Q6ZT12 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.87□□□□□ -2.27
UBR3Q6ZT12 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
UBR3Q6ZT12 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.87□□□□□ -2.27
UBR3Q6ZT12 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.87□□□□□ -2.27
UBR3Q6ZT12 AC015849.6-201ENST00000605454 474 ntBASIC0.87□□□□□ -2.27
UBR3Q6ZT12 MIR2909-201ENST00000617113 69 ntBASIC0.87□□□□□ -2.27
UBR3Q6ZT12 AL356473.1-201ENST00000406203 1408 ntBASIC0.87□□□□□ -2.27
UBR3Q6ZT12 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
UBR3Q6ZT12 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.86□□□□□ -2.27
UBR3Q6ZT12 RNU6-1249P-201ENST00000363237 111 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 OR9R1P-201ENST00000412200 877 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AL034418.1-201ENST00000448675 860 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AC079448.1-201ENST00000449377 373 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AL009028.1-201ENST00000604895 802 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR3Q6ZT12 U3.29-201ENST00000391296 212 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 EDDM3CP-201ENST00000415977 425 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AL109913.1-201ENST00000421173 514 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR3Q6ZT12 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR3Q6ZT12 RPL30P5-201ENST00000494923 336 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR3Q6ZT12 TPT1P8-201ENST00000510120 555 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AC067942.3-201ENST00000512025 362 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AC016065.2-201ENST00000514530 444 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.86□□□□□ -2.27
UBR3Q6ZT12 MED28P6-201ENST00000558776 231 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AL450336.1-201ENST00000605180 586 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AL031775.1-201ENST00000607014 887 ntBASIC0.86□□□□□ -2.27
UBR3Q6ZT12 AC092628.1-201ENST00000436250 252 ntBASIC0.85□□□□□ -2.27
UBR3Q6ZT12 AC092393.1-201ENST00000439625 742 ntBASIC0.85□□□□□ -2.27
UBR3Q6ZT12 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.85□□□□□ -2.27
UBR3Q6ZT12 DYNLL1P5-201ENST00000467158 270 ntBASIC0.85□□□□□ -2.27
UBR3Q6ZT12 AC139453.3-201ENST00000493276 369 ntBASIC0.85□□□□□ -2.27
UBR3Q6ZT12 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
UBR3Q6ZT12 AP005137.2-201ENST00000609238 400 ntBASIC0.85□□□□□ -2.27
UBR3Q6ZT12 AC090517.3-201ENST00000625170 141 ntBASIC0.85□□□□□ -2.27
UBR3Q6ZT12 RNU6-942P-201ENST00000363002 107 ntBASIC0.84□□□□□ -2.27
UBR3Q6ZT12 MIR1197-201ENST00000408818 88 ntBASIC0.84□□□□□ -2.27
UBR3Q6ZT12 RPS15AP38-201ENST00000413110 372 ntBASIC0.84□□□□□ -2.27
UBR3Q6ZT12 AC104997.1-201ENST00000519761 717 ntBASIC0.84□□□□□ -2.27
UBR3Q6ZT12 MIR4713-201ENST00000582691 75 ntBASIC0.84□□□□□ -2.27
UBR3Q6ZT12 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.84□□□□□ -2.27
UBR3Q6ZT12 AC090970.3-201ENST00000612566 866 ntBASIC0.84□□□□□ -2.27
UBR3Q6ZT12 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.27
UBR3Q6ZT12 RNA5SP125-201ENST00000364843 120 ntBASIC0.84□□□□□ -2.28
UBR3Q6ZT12 AL158823.1-201ENST00000418441 478 ntBASIC0.84□□□□□ -2.28
UBR3Q6ZT12 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.84□□□□□ -2.28
UBR3Q6ZT12 AP003072.2-201ENST00000527756 676 ntBASIC0.84□□□□□ -2.28
UBR3Q6ZT12 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.84□□□□□ -2.28
UBR3Q6ZT12 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.84□□□□□ -2.28
UBR3Q6ZT12 GAS5-AS1-201ENST00000602767 694 ntBASIC0.84□□□□□ -2.28
UBR3Q6ZT12 AC090132.2-201ENST00000615881 347 ntBASIC0.84□□□□□ -2.28
UBR3Q6ZT12 OR4G3P-201ENST00000633500 913 ntBASIC0.84□□□□□ -2.28
UBR3Q6ZT12 AC016716.1-201ENST00000265882 708 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
UBR3Q6ZT12 RNA5SP347-201ENST00000362445 119 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 RNA5SP276-201ENST00000362580 94 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 RNU6-1197P-201ENST00000391183 107 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 C1DP3-201ENST00000455013 423 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.83□□□□□ -2.28
UBR3Q6ZT12 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
UBR3Q6ZT12 AC112518.2-201ENST00000508565 425 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 RNU6-229P-201ENST00000516614 102 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.83□□□□□ -2.28
UBR3Q6ZT12 AC021646.1-201ENST00000605469 484 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 AC027309.3-201ENST00000623419 351 ntBASIC0.83□□□□□ -2.28
UBR3Q6ZT12 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.83□□□□□ -2.28
UBR3Q6ZT12 NACAP2-201ENST00000318548 624 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 RNU6-666P-201ENST00000363499 107 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 RNU6-670P-201ENST00000364312 104 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AL136372.1-201ENST00000403060 228 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC244453.4-201ENST00000419150 388 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC246680.2-201ENST00000422106 389 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC244035.1-201ENST00000430042 390 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 MICF-203ENST00000432679 129 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC241584.1-201ENST00000438469 1241 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC103851.1-201ENST00000506833 274 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 SCARNA3-201ENST00000517097 143 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 RRN3P3-201ENST00000549207 578 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AP002791.1-201ENST00000623291 381 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AP003485.1-201ENST00000625093 753 ntBASIC0.82□□□□□ -2.28
UBR3Q6ZT12 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
UBR3Q6ZT12 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms