Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AL355615.1-201ENST00000406187 641 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 TXNP7-201ENST00000406296 293 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 U6atac.2-201ENST00000408644 118 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 RPP40P1-201ENST00000426762 456 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 RPS29P28-201ENST00000446439 141 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 RPS27P23-201ENST00000487608 251 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 RPS3AP22-201ENST00000488297 769 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 FAM206BP-201ENST00000510179 541 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 HIGD1AP6-201ENST00000521833 279 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 AC008015.1-201ENST00000555505 465 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 AC012435.1-202ENST00000568772 240 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 AC080013.4-201ENST00000607624 649 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 AL356585.4-201ENST00000623078 1229 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 AL359740.1-201ENST00000624340 592 ntBASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
CCDC171Q6TFL3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 SFR1P2-201ENST00000421841 730 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 MTND1P33-201ENST00000446251 917 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 SUMO2P2-201ENST00000456482 255 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 HMGB1P36-201ENST00000487709 576 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 RNA5SP490-201ENST00000517141 136 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 AC105245.1-201ENST00000581934 244 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 AC079610.2-201ENST00000604818 690 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 AC006213.4-201ENST00000616184 634 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 OR4G1P-203ENST00000641984 1631 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 MFSD8-213ENST00000641134 1327 ntBASIC1.31□□□□□ -2.2
CCDC171Q6TFL3 AC007785.2-201ENST00000598627 1916 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 U3.13-201ENST00000364804 214 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 RNU2-49P-201ENST00000410666 184 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 OR6C66P-201ENST00000414917 930 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 RPL30P4-201ENST00000429309 333 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 MTCO1P48-201ENST00000448024 1096 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 SNORD97-201ENST00000459187 142 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 AC132942.1-201ENST00000486753 483 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 AF131216.2-201ENST00000512316 564 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 MIR3198-2-201ENST00000577868 80 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 AL022067.1-201ENST00000602426 454 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 AC016925.2-201ENST00000605108 242 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 AL391597.1-201ENST00000618707 694 ntBASIC1.3□□□□□ -2.2
CCDC171Q6TFL3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 AC027514.1-201ENST00000588561 1603 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 SNORD14B-201ENST00000364533 90 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 RNU6-217P-201ENST00000384164 104 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 AC092047.1-201ENST00000424997 240 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 RPL30P12-201ENST00000474666 353 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 AC114801.2-201ENST00000503825 781 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 SNORA31.6-201ENST00000516241 130 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 AC004217.3-201ENST00000551552 878 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 AC022254.1-201ENST00000567857 235 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 MIR4713-201ENST00000582691 75 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 BNIP3P25-201ENST00000596023 559 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 AC024595.1-201ENST00000623088 387 ntBASIC1.29□□□□□ -2.2
CCDC171Q6TFL3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 RNU6-152P-201ENST00000384037 107 ntBASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 RNU6-748P-201ENST00000384648 107 ntBASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 MIR513A1-201ENST00000385138 129 ntBASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 RNA5SP212-201ENST00000391223 107 ntBASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 NDUFS5P1-201ENST00000405668 289 ntBASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 MTND6P13-201ENST00000443510 523 ntBASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 AL096803.2-201ENST00000450032 677 ntBASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 RNA5SP165-201ENST00000517142 115 ntBASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 AC103810.8-201ENST00000607347 118 ntBASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC171Q6TFL3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
CCDC171Q6TFL3 SNORA62.1-201ENST00000364287 154 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 MIR518E-201ENST00000385252 88 ntBASIC1.27□□□□□ -2.21
CCDC171Q6TFL3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms