Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 RPL21P41-201ENST00000459863 264 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 RPS15AP34-201ENST00000487776 387 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AC139453.3-201ENST00000493276 369 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 SNORD60.2-201ENST00000516883 86 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 HIGD1AP1-201ENST00000550979 275 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AL157871.3-201ENST00000557231 293 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AC234778.2-201ENST00000566241 354 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AC068135.2-201ENST00000569293 1028 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AC010525.2-201ENST00000590920 195 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AL035413.2-201ENST00000604801 525 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 uc_338.34-201ENST00000617467 174 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 MIR3662-201ENST00000637030 95 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 Y_RNA.126-201ENST00000363382 111 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 RNU6-715P-201ENST00000365204 103 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 RNU6-38P-201ENST00000384085 107 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 MIR578-201ENST00000384828 96 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 MIR301A-201ENST00000385261 86 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 RPL32P23-201ENST00000397237 405 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 RN7SKP156-201ENST00000410308 342 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 RNU2-68P-201ENST00000410878 191 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 AL158156.1-201ENST00000422509 473 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 AL669831.1-202ENST00000428504 417 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 GTF2IP13-201ENST00000438487 386 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 AL360271.2-201ENST00000447710 161 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 RPS15AP27-201ENST00000449183 343 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 RNU6-333P-201ENST00000459117 107 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 RN7SL132P-201ENST00000478131 296 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 RPL38P4-201ENST00000502376 214 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 AC009902.1-201ENST00000519351 183 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 MIR1273C-201ENST00000578669 77 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 AL020991.1-201ENST00000612314 373 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 SNORD39.4-201ENST00000620099 78 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 OR4G1P-203ENST00000641984 1631 ntBASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RUNDC3AQ59EK9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 RNU6-371P-201ENST00000364283 108 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 MYL8P-204ENST00000431574 518 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 CALM1P1-201ENST00000442082 433 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 MTND3P16-201ENST00000452205 344 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 SCARNA18-201ENST00000459004 134 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 FTH1P2-201ENST00000466086 412 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 RPL23AP11-201ENST00000475260 469 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 AC022493.1-201ENST00000492984 337 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 PSMA2P1-201ENST00000526365 646 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 AL118558.2-201ENST00000556294 238 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 MTCO3P24-201ENST00000572729 782 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 RN7SL703P-201ENST00000578485 302 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 MIR548AC-201ENST00000585049 88 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 AC007938.3-201ENST00000604965 623 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 DUSP12P1-201ENST00000612874 516 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 AC099506.2-201ENST00000623074 221 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 AC119674.1-207ENST00000641355 633 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 AC007823.1-201ENST00000569932 1566 ntBASIC3.28□□□□□ -1.88
RUNDC3AQ59EK9 MTND4P14-201ENST00000435799 1354 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 FAM35BP-202ENST00000497389 3337 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 SNORD9-201ENST00000362566 104 ntBASIC3.27□□□□□ -1.89
RUNDC3AQ59EK9 RNU1-64P-201ENST00000365443 163 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms