Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC093677.1-201ENST00000514414 678 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 SMURF2P1-201ENST00000514992 481 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AP003497.1-201ENST00000528472 562 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AC009268.1-201ENST00000561352 1203 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 MIR3660-201ENST00000584845 100 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.09□□□□□ -2.23
CCDC58Q4VC31 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AF131215.7-201ENST00000602443 707 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AC136601.2-201ENST00000604356 474 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AC005539.1-201ENST00000443768 1479 ntBASIC1.09□□□□□ -2.24
CCDC58Q4VC31 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC58Q4VC31 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 TEX21P-201ENST00000447107 1476 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 CBX3P1-201ENST00000325243 554 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 SNORA51.6-201ENST00000384151 125 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 MIR95-201ENST00000385072 81 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 RNU2-33P-201ENST00000410344 192 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 BTF3P8-201ENST00000414577 526 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 OR51A5P-201ENST00000415429 942 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 USP9YP24-201ENST00000434374 697 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 HMGB3P12-201ENST00000438745 556 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 MTCO1P53-201ENST00000441633 699 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AL161788.1-201ENST00000441805 169 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AL137159.1-201ENST00000452808 512 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AC117503.1-201ENST00000472241 394 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AC004223.1-201ENST00000479840 271 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 SNORA48.11-201ENST00000517015 89 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AP003066.2-201ENST00000529375 555 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AC135279.1-201ENST00000543493 504 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AL161670.1-201ENST00000554348 137 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 BX322635.1-201ENST00000605804 496 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 AL590396.2-201ENST00000636511 1041 ntBASIC1.08□□□□□ -2.24
CCDC58Q4VC31 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CCDC58Q4VC31 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 MTCO1P23-201ENST00000415223 1526 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 MIR561-201ENST00000385216 97 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 RNU1-78P-201ENST00000391248 165 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AC018868.1-201ENST00000491307 315 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 NDUFA5P6-201ENST00000542110 379 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AL132857.1-201ENST00000555180 708 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AC116312.1-201ENST00000606841 314 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC58Q4VC31 U1.36-201ENST00000620684 176 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 MIR3199-2-201ENST00000636243 86 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 AC119674.1-220ENST00000641502 1048 ntBASIC1.07□□□□□ -2.24
CCDC58Q4VC31 RPL37P10-201ENST00000412884 288 ntBASIC1.06□□□□□ -2.24
CCDC58Q4VC31 AC007919.1-201ENST00000429380 217 ntBASIC1.06□□□□□ -2.24
CCDC58Q4VC31 RPL31P54-201ENST00000429803 370 ntBASIC1.06□□□□□ -2.24
CCDC58Q4VC31 AL691517.1-201ENST00000440833 1235 ntBASIC1.06□□□□□ -2.24
CCDC58Q4VC31 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
CCDC58Q4VC31 ARPC3P5-201ENST00000448802 534 ntBASIC1.06□□□□□ -2.24
CCDC58Q4VC31 AC005908.1-201ENST00000468701 347 ntBASIC1.06□□□□□ -2.24
CCDC58Q4VC31 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC58Q4VC31 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC58Q4VC31 AC005832.3-201ENST00000537929 631 ntBASIC1.06□□□□□ -2.24
CCDC58Q4VC31 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.06□□□□□ -2.24
CCDC58Q4VC31 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC58Q4VC31 AL355802.3-201ENST00000607571 545 ntBASIC1.06□□□□□ -2.24
CCDC58Q4VC31 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC58Q4VC31 ZNF680P1-201ENST00000436625 1469 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 MIR518D-201ENST00000385014 87 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 NDUFS5P4-201ENST00000412983 318 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AL121882.1-201ENST00000422893 417 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AC244505.3-201ENST00000454598 187 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AC104997.1-201ENST00000519761 717 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.05□□□□□ -2.24
CCDC58Q4VC31 SNRPGP17-201ENST00000603780 214 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AC021646.1-201ENST00000605469 484 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 MTND1P37-201ENST00000636562 264 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 AP000560.1-201ENST00000624150 1937 ntBASIC1.05□□□□□ -2.24
CCDC58Q4VC31 RNU2-36P-201ENST00000410361 191 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms