Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 USP9YP28-201ENST00000435142 589 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 RPS15AP27-201ENST00000449183 343 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 KC877373.1-201ENST00000479066 408 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 RPL23AP41-201ENST00000484754 458 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 RPS15AP36-201ENST00000492022 382 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 AC083906.5-201ENST00000503722 328 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 NDUFB4P2-201ENST00000509515 391 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 SNORA18.6-201ENST00000516792 115 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 RNU6-430P-201ENST00000517078 107 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 RN7SKP40-201ENST00000517211 242 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 MTND1P5-201ENST00000517906 940 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 SUB1P1-201ENST00000524415 382 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 AP003392.2-201ENST00000527269 208 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 AP003181.2-201ENST00000528941 181 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 AL356432.3-201ENST00000568952 465 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 MIR3118-1-201ENST00000581787 76 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 AC103710.1-201ENST00000610003 901 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 BX664608.1-201ENST00000610519 487 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 MTND1P37-201ENST00000636562 264 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.43□□□□□ -1.86
CCDC96Q2M329 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC96Q2M329 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC96Q2M329 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC96Q2M329 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CCDC96Q2M329 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC093831.2-201ENST00000624393 3427 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC96Q2M329 RNU1-39P-201ENST00000383897 165 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 RNU6-259P-201ENST00000383999 107 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 Y_RNA.516-201ENST00000384541 124 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 RNU6-851P-201ENST00000384565 107 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 RNU6-140P-201ENST00000384566 108 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 CCNG1P1-201ENST00000406783 885 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 C1DP2-201ENST00000418167 426 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 AL451054.2-201ENST00000420896 202 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 RPL22P17-201ENST00000438729 315 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC103975.1-201ENST00000482506 483 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 RNU6-390P-201ENST00000516259 103 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 Y_RNA.672-201ENST00000516289 104 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC107934.1-201ENST00000522215 217 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC025165.5-201ENST00000602802 578 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC004908.2-201ENST00000609090 574 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC008498.1-201ENST00000613012 531 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 AC136475.10-201ENST00000620253 385 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 SCARNA15.3-201ENST00000626315 122 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 SCARNA4.1-201ENST00000628597 123 ntBASIC3.42□□□□□ -1.86
CCDC96Q2M329 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CCDC96Q2M329 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC96Q2M329 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 RNU6-1215P-201ENST00000384441 102 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 MIR19A-201ENST00000384878 82 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 FCF1P10-201ENST00000407590 479 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC96Q2M329 MTCO3P30-201ENST00000426425 670 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 AC104651.1-201ENST00000427559 735 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 OR2AS1P-201ENST00000427827 319 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 USP12PX-201ENST00000432383 1057 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 MTCO3P45-201ENST00000443036 613 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 MTND1P3-201ENST00000484956 952 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 RN7SL633P-201ENST00000488974 297 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 AL160314.1-201ENST00000490836 438 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 AC107016.2-201ENST00000547968 190 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC96Q2M329 MIR3682-201ENST00000581338 84 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 AL355877.2-201ENST00000603670 358 ntBASIC3.41□□□□□ -1.86
CCDC96Q2M329 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms