Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC241584.1-201ENST00000438469 1241 ntBASIC0.48□□□□□ -2.33
TFF3Q07654 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.48□□□□□ -2.33
TFF3Q07654 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.48□□□□□ -2.33
TFF3Q07654 snoU13.4-201ENST00000458916 104 ntBASIC0.48□□□□□ -2.33
TFF3Q07654 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.48□□□□□ -2.33
TFF3Q07654 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.48□□□□□ -2.33
TFF3Q07654 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
TFF3Q07654 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
TFF3Q07654 AC103710.4-201ENST00000609301 899 ntBASIC0.48□□□□□ -2.33
TFF3Q07654 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.48□□□□□ -2.33
TFF3Q07654 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.47□□□□□ -2.33
TFF3Q07654 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
TFF3Q07654 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
TFF3Q07654 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.47□□□□□ -2.33
TFF3Q07654 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.47□□□□□ -2.33
TFF3Q07654 UBE2V2P3-201ENST00000433562 437 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 AC023347.2-201ENST00000433994 462 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 DYNLL1P5-201ENST00000467158 270 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 AC112518.2-201ENST00000508565 425 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.47□□□□□ -2.33
TFF3Q07654 AC118273.2-201ENST00000532092 465 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 AL109933.3-201ENST00000619095 188 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 AP002791.1-201ENST00000623291 381 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 AC116563.2-201ENST00000624751 535 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 AC025048.6-202ENST00000627667 438 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 AC083865.1-201ENST00000636634 831 ntBASIC0.47□□□□□ -2.33
TFF3Q07654 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.47□□□□□ -2.33
TFF3Q07654 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TFF3Q07654 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
TFF3Q07654 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TFF3Q07654 RNU6-220P-201ENST00000390919 107 ntBASIC0.46□□□□□ -2.34
TFF3Q07654 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.46□□□□□ -2.34
TFF3Q07654 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.46□□□□□ -2.34
TFF3Q07654 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.46□□□□□ -2.34
TFF3Q07654 AC021146.8-201ENST00000507455 733 ntBASIC0.46□□□□□ -2.34
TFF3Q07654 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.46□□□□□ -2.34
TFF3Q07654 AC092451.2-201ENST00000538746 658 ntBASIC0.46□□□□□ -2.34
TFF3Q07654 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.46□□□□□ -2.34
TFF3Q07654 AC106900.2-201ENST00000604994 317 ntBASIC0.46□□□□□ -2.34
TFF3Q07654 AC087045.1-201ENST00000605856 382 ntBASIC0.46□□□□□ -2.34
TFF3Q07654 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
TFF3Q07654 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
TFF3Q07654 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TFF3Q07654 MIR100-201ENST00000385259 80 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 RNU6-516P-201ENST00000411381 104 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 AL606490.4-201ENST00000423117 127 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 AC098614.2-201ENST00000426040 255 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 AC093106.2-201ENST00000428212 385 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 AL161651.1-201ENST00000440882 223 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 AC087588.1-201ENST00000462203 316 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.45□□□□□ -2.34
TFF3Q07654 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TFF3Q07654 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.45□□□□□ -2.34
TFF3Q07654 AC093677.1-201ENST00000514414 678 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.45□□□□□ -2.34
TFF3Q07654 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.45□□□□□ -2.34
TFF3Q07654 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
TFF3Q07654 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.45□□□□□ -2.34
TFF3Q07654 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.45□□□□□ -2.34
TFF3Q07654 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.45□□□□□ -2.34
TFF3Q07654 BNIP3P25-201ENST00000596023 559 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 AL161629.2-201ENST00000615347 275 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 AL118508.4-201ENST00000624142 1176 ntBASIC0.45□□□□□ -2.34
TFF3Q07654 U3.29-201ENST00000391296 212 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 RNA5SP511-201ENST00000410487 115 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC0.44□□□□□ -2.34
TFF3Q07654 AC006461.1-201ENST00000412637 326 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 MTCYBP24-201ENST00000420387 1106 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.44□□□□□ -2.34
TFF3Q07654 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.44□□□□□ -2.34
TFF3Q07654 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.44□□□□□ -2.34
TFF3Q07654 AC105313.1-201ENST00000509121 353 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 SNORA44.1-201ENST00000517031 108 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 AP003355.1-201ENST00000518956 587 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 MIR5571-201ENST00000577998 113 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.44□□□□□ -2.34
TFF3Q07654 AL355472.4-201ENST00000610233 626 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 AC012676.2-201ENST00000619258 186 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 uc_338.17-201ENST00000619633 179 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
TFF3Q07654 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TFF3Q07654 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.43□□□□□ -2.34
TFF3Q07654 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
TFF3Q07654 RNU6-716P-201ENST00000365621 103 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 AC018630.2-202ENST00000422992 927 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.43□□□□□ -2.34
TFF3Q07654 SYPL1P1-201ENST00000473622 768 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.43□□□□□ -2.34
TFF3Q07654 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.43□□□□□ -2.34
TFF3Q07654 AK3P2-201ENST00000507976 429 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 UBL5P1-201ENST00000507979 193 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 RN7SKP277-201ENST00000516895 283 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.43□□□□□ -2.34
TFF3Q07654 AC025857.1-201ENST00000525252 377 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 AC019288.1-201ENST00000557918 224 ntBASIC0.43□□□□□ -2.34
TFF3Q07654 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.43□□□□□ -2.34
TFF3Q07654 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.43□□□□□ -2.34
TFF3Q07654 SULT1C2P1-202ENST00000562418 459 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms