Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.24□□□□□ -1.89
LTBQ06643 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.24□□□□□ -1.89
LTBQ06643 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LTBQ06643 AP003385.6-201ENST00000531603 374 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.24□□□□□ -1.89
LTBQ06643 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.24□□□□□ -1.89
LTBQ06643 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.24□□□□□ -1.89
LTBQ06643 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
LTBQ06643 AC104984.5-201ENST00000586878 94 ntBASIC3.24□□□□□ -1.89
LTBQ06643 RMST_8.1-201ENST00000610287 165 ntBASIC3.24□□□□□ -1.89
LTBQ06643 PART1_1.1-201ENST00000611761 217 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AC004696.1-201ENST00000614345 607 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AP001486.3-201ENST00000615334 372 ntBASIC3.24□□□□□ -1.89
LTBQ06643 AL603758.1-201ENST00000618654 241 ntBASIC3.24□□□□□ -1.89
LTBQ06643 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.24□□□□□ -1.89
LTBQ06643 U6.114-201ENST00000636407 96 ntBASIC3.24□□□□□ -1.89
LTBQ06643 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LTBQ06643 AC007823.1-201ENST00000569932 1566 ntBASIC3.24□□□□□ -1.89
LTBQ06643 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.24□□□□□ -1.89
LTBQ06643 MTCO1P9-201ENST00000505577 1534 ntBASIC3.24□□□□□ -1.89
LTBQ06643 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LTBQ06643 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LTBQ06643 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
LTBQ06643 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LTBQ06643 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LTBQ06643 Y_RNA.162-201ENST00000363683 102 ntBASIC3.23□□□□□ -1.89
LTBQ06643 U3.12-201ENST00000364498 214 ntBASIC3.23□□□□□ -1.89
LTBQ06643 RNA5SP235-201ENST00000365411 114 ntBASIC3.23□□□□□ -1.89
LTBQ06643 Y_RNA.431-201ENST00000384086 102 ntBASIC3.23□□□□□ -1.89
LTBQ06643 RNU6-692P-201ENST00000384496 107 ntBASIC3.23□□□□□ -1.89
LTBQ06643 MIR135A2-201ENST00000384854 100 ntBASIC3.23□□□□□ -1.89
LTBQ06643 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LTBQ06643 U3.39-201ENST00000408569 239 ntBASIC3.23□□□□□ -1.89
LTBQ06643 RPL21P24-201ENST00000413752 448 ntBASIC3.23□□□□□ -1.89
LTBQ06643 OR6C66P-201ENST00000414917 930 ntBASIC3.23□□□□□ -1.89
LTBQ06643 DBIP2-201ENST00000419076 262 ntBASIC3.23□□□□□ -1.89
LTBQ06643 NCOR1P3-201ENST00000420479 303 ntBASIC3.23□□□□□ -1.89
LTBQ06643 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.23□□□□□ -1.89
LTBQ06643 AC244098.2-201ENST00000422068 99 ntBASIC3.23□□□□□ -1.89
LTBQ06643 RPL21P23-201ENST00000446654 460 ntBASIC3.23□□□□□ -1.89
LTBQ06643 SNRPFP3-201ENST00000457792 225 ntBASIC3.23□□□□□ -1.89
LTBQ06643 RNU7-66P-201ENST00000459469 62 ntBASIC3.23□□□□□ -1.89
LTBQ06643 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.23□□□□□ -1.89
LTBQ06643 RPL23AP11-201ENST00000475260 469 ntBASIC3.23□□□□□ -1.89
LTBQ06643 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LTBQ06643 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
LTBQ06643 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.23□□□□□ -1.89
LTBQ06643 SNORA70.18-201ENST00000516696 98 ntBASIC3.23□□□□□ -1.89
LTBQ06643 RN7SKP60-201ENST00000516985 239 ntBASIC3.23□□□□□ -1.89
LTBQ06643 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.23□□□□□ -1.89
LTBQ06643 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.23□□□□□ -1.89
LTBQ06643 AP001804.3-201ENST00000525146 880 ntBASIC3.23□□□□□ -1.89
LTBQ06643 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.23□□□□□ -1.89
LTBQ06643 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.23□□□□□ -1.89
LTBQ06643 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.23□□□□□ -1.89
LTBQ06643 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.23□□□□□ -1.89
LTBQ06643 AC116096.1-201ENST00000566804 2314 ntBASIC3.23□□□□□ -1.89
LTBQ06643 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.23□□□□□ -1.89
LTBQ06643 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.23□□□□□ -1.89
LTBQ06643 AC103710.3-201ENST00000608157 948 ntBASIC3.23□□□□□ -1.89
LTBQ06643 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.23□□□□□ -1.89
LTBQ06643 AL390240.1-201ENST00000612950 384 ntBASIC3.23□□□□□ -1.89
LTBQ06643 uc_338.34-201ENST00000617467 174 ntBASIC3.23□□□□□ -1.89
LTBQ06643 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.23□□□□□ -1.89
LTBQ06643 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.23□□□□□ -1.89
LTBQ06643 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LTBQ06643 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LTBQ06643 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LTBQ06643 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
LTBQ06643 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
LTBQ06643 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.22□□□□□ -1.89
LTBQ06643 AC068647.1-201ENST00000489539 2265 ntBASIC3.22□□□□□ -1.89
LTBQ06643 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LTBQ06643 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LTBQ06643 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LTBQ06643 SNORA31-201ENST00000362607 130 ntBASIC3.22□□□□□ -1.89
LTBQ06643 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LTBQ06643 Y_RNA.384-201ENST00000383909 102 ntBASIC3.22□□□□□ -1.89
LTBQ06643 Y_RNA.387-201ENST00000383918 102 ntBASIC3.22□□□□□ -1.89
LTBQ06643 MIR490-201ENST00000384865 128 ntBASIC3.22□□□□□ -1.89
LTBQ06643 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LTBQ06643 SNORA48.5-201ENST00000391143 135 ntBASIC3.22□□□□□ -1.89
LTBQ06643 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LTBQ06643 MIR1183-201ENST00000408856 89 ntBASIC3.22□□□□□ -1.89
LTBQ06643 MRPS18BP2-201ENST00000434310 759 ntBASIC3.22□□□□□ -1.89
LTBQ06643 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.22□□□□□ -1.89
LTBQ06643 RPL36AP6-201ENST00000435770 321 ntBASIC3.22□□□□□ -1.89
LTBQ06643 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LTBQ06643 ANP32BP2-201ENST00000454525 545 ntBASIC3.22□□□□□ -1.89
LTBQ06643 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.22□□□□□ -1.89
LTBQ06643 RNU6-1208P-201ENST00000459588 107 ntBASIC3.22□□□□□ -1.89
LTBQ06643 SNORD19B-201ENST00000459623 84 ntBASIC3.22□□□□□ -1.89
LTBQ06643 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.22□□□□□ -1.89
LTBQ06643 AC104806.1-201ENST00000508720 308 ntBASIC3.22□□□□□ -1.89
LTBQ06643 IGKV2D-23-201ENST00000518179 286 ntBASIC3.22□□□□□ -1.89
LTBQ06643 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.22□□□□□ -1.89
LTBQ06643 RANP9-201ENST00000519957 271 ntBASIC3.22□□□□□ -1.89
LTBQ06643 MTND4P7-201ENST00000523876 130 ntBASIC3.22□□□□□ -1.89
LTBQ06643 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.22□□□□□ -1.89
LTBQ06643 AC026333.2-201ENST00000542164 106 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms