Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.58□□□□□ -2.16
AP1S1P61966 AC068944.2-201ENST00000610373 403 ntBASIC1.58□□□□□ -2.16
AP1S1P61966 AL354696.1-201ENST00000614652 497 ntBASIC1.58□□□□□ -2.16
AP1S1P61966 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
AP1S1P61966 AL157770.1-201ENST00000623049 439 ntBASIC1.58□□□□□ -2.16
AP1S1P61966 MTCO1P9-201ENST00000505577 1534 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
AP1S1P61966 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
AP1S1P61966 AL589826.1-201ENST00000340697 249 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S1P61966 Y_RNA.408-201ENST00000383987 102 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 VN1R36P-201ENST00000414936 291 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S1P61966 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.57□□□□□ -2.16
AP1S1P61966 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S1P61966 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.57□□□□□ -2.16
AP1S1P61966 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S1P61966 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S1P61966 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.57□□□□□ -2.16
AP1S1P61966 RPL26P9-201ENST00000457466 433 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 RPS20P20-201ENST00000460498 340 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.57□□□□□ -2.16
AP1S1P61966 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S1P61966 AC022880.1-201ENST00000534017 973 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.57□□□□□ -2.16
AP1S1P61966 LINC00933-203ENST00000559812 219 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.57□□□□□ -2.16
AP1S1P61966 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.57□□□□□ -2.16
AP1S1P61966 AC007349.4-201ENST00000608114 532 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 AL391813.2-201ENST00000609113 322 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 AL359757.2-201ENST00000624309 274 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
AP1S1P61966 ZNF72P-201ENST00000425869 1908 ntBASIC1.57□□□□□ -2.16
AP1S1P61966 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.56□□□□□ -2.16
AP1S1P61966 RNU6-28P-201ENST00000362378 107 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 U8.3-201ENST00000363321 132 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 RNU2-33P-201ENST00000410344 192 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 RNU2-42P-201ENST00000410697 113 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.56□□□□□ -2.16
AP1S1P61966 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.56□□□□□ -2.16
AP1S1P61966 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.56□□□□□ -2.16
AP1S1P61966 BPY2DP-201ENST00000422208 265 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 AL353729.1-201ENST00000425044 720 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.56□□□□□ -2.16
AP1S1P61966 HSPE1P21-201ENST00000438283 308 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 AC002381.1-201ENST00000447049 280 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 AC079776.3-201ENST00000450665 370 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 AC087884.1-201ENST00000469738 328 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 AC034222.1-201ENST00000494052 532 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 RNU6-334P-201ENST00000517072 102 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.56□□□□□ -2.16
AP1S1P61966 CBX3P7-201ENST00000532876 502 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.56□□□□□ -2.16
AP1S1P61966 AC005261.5-201ENST00000596280 355 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 AC011451.2-201ENST00000604303 598 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 uc_338.5-201ENST00000611839 155 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.56□□□□□ -2.16
AP1S1P61966 AC109454.4-201ENST00000623411 649 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.56□□□□□ -2.16
AP1S1P61966 AC010889.1-201ENST00000566193 2666 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
AP1S1P61966 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.56□□□□□ -2.16
AP1S1P61966 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
AP1S1P61966 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
AP1S1P61966 Y_RNA.234-201ENST00000364409 97 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 SNORA67.6-201ENST00000391093 99 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
AP1S1P61966 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.55□□□□□ -2.16
AP1S1P61966 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.55□□□□□ -2.16
AP1S1P61966 SKA2P1-201ENST00000425592 390 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 UBE2D3P3-201ENST00000426992 425 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 HMGB1P9-201ENST00000429856 646 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S1P61966 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
AP1S1P61966 MTND4P15-201ENST00000437913 1033 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.55□□□□□ -2.16
AP1S1P61966 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S1P61966 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S1P61966 SNORD121B-201ENST00000458838 81 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 RNU1-98P-201ENST00000458992 160 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 AC055855.1-201ENST00000489563 579 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 RPS27AP10-201ENST00000496103 208 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
AP1S1P61966 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S1P61966 LTV1P1-201ENST00000510683 1237 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S1P61966 AC022447.1-201ENST00000515358 464 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 RN7SKP219-201ENST00000516825 296 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 MTCO3P15-201ENST00000526563 574 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 AL359212.1-201ENST00000556608 614 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.55□□□□□ -2.16
AP1S1P61966 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 AL021997.1-201ENST00000605757 193 ntBASIC1.55□□□□□ -2.16
AP1S1P61966 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.55□□□□□ -2.16
AP1S1P61966 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.55□□□□□ -2.16
AP1S1P61966 SNORA23-201ENST00000365128 182 ntBASIC1.54□□□□□ -2.16
AP1S1P61966 RNA5SP213-201ENST00000391031 106 ntBASIC1.54□□□□□ -2.16
AP1S1P61966 RNU6-952P-201ENST00000391164 108 ntBASIC1.54□□□□□ -2.16
AP1S1P61966 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
AP1S1P61966 MIR888-201ENST00000401186 77 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms