Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.75□□□□□ -1.81
RHBDL3P58872 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
RHBDL3P58872 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDL3P58872 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
RHBDL3P58872 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
RHBDL3P58872 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDL3P58872 RNU6-750P-201ENST00000390946 107 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDL3P58872 USP9YP6-201ENST00000413550 854 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 RPL30P2-201ENST00000414021 291 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 AC114491.1-201ENST00000416095 246 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 RPL35AP12-201ENST00000425362 338 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 AC009414.1-201ENST00000427200 443 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDL3P58872 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDL3P58872 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.74□□□□□ -1.81
RHBDL3P58872 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDL3P58872 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.74□□□□□ -1.81
RHBDL3P58872 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.74□□□□□ -1.81
RHBDL3P58872 AC022447.1-201ENST00000515358 464 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 SNORD19.2-201ENST00000516978 73 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
RHBDL3P58872 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.74□□□□□ -1.81
RHBDL3P58872 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.74□□□□□ -1.81
RHBDL3P58872 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.74□□□□□ -1.81
RHBDL3P58872 AL589743.7-201ENST00000612637 233 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RHBDL3P58872 AC006386.2-201ENST00000624491 75 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 AC012005.1-201ENST00000624575 75 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RHBDL3P58872 AC138915.1-201ENST00000565427 1685 ntBASIC3.74□□□□□ -1.81
RHBDL3P58872 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.73□□□□□ -1.81
RHBDL3P58872 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDL3P58872 AL355596.1-201ENST00000565399 3996 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDL3P58872 Y_RNA.51-201ENST00000362725 102 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 RNU1-140P-201ENST00000365040 165 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
RHBDL3P58872 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDL3P58872 AP002088.1-201ENST00000382740 395 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 SNORD21-201ENST00000383953 95 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 RNU6-456P-201ENST00000384493 107 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RHBDL3P58872 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDL3P58872 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDL3P58872 AL365338.1-201ENST00000422282 858 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 MTATP6P16-201ENST00000434543 526 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDL3P58872 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.73□□□□□ -1.81
RHBDL3P58872 Z99127.3-201ENST00000448158 395 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.73□□□□□ -1.81
RHBDL3P58872 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDL3P58872 C1DP4-201ENST00000455429 424 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.73□□□□□ -1.81
RHBDL3P58872 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDL3P58872 AC096576.1-201ENST00000489014 359 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC139453.3-201ENST00000493276 369 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC097462.2-201ENST00000504623 481 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDL3P58872 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDL3P58872 RNU6-123P-201ENST00000516163 102 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 SCARNA20.6-201ENST00000517251 106 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.73□□□□□ -1.81
RHBDL3P58872 OR4R1P-201ENST00000529879 463 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AP002404.1-201ENST00000532005 451 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.73□□□□□ -1.81
RHBDL3P58872 LARP7P3-201ENST00000579888 337 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC024619.4-201ENST00000580924 316 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC010620.2-201ENST00000600135 313 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AL121992.2-201ENST00000606262 256 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC093732.2-201ENST00000607950 274 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 uc_338.11-201ENST00000619132 160 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC009509.4-201ENST00000619202 509 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AC009161.2-201ENST00000624626 138 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 AL157786.1-207ENST00000627771 695 ntBASIC3.73□□□□□ -1.81
RHBDL3P58872 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RHBDL3P58872 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RHBDL3P58872 RNU6-181P-201ENST00000363225 107 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 RNU6-61P-201ENST00000365528 109 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 Y_RNA.367-201ENST00000365544 101 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 SNORA4.3-201ENST00000365564 137 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 RNU5A-6P-201ENST00000384136 116 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 MIR454-201ENST00000390180 115 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RHBDL3P58872 U3.26-201ENST00000391236 204 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 RNU6-1025P-201ENST00000410629 104 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 RPS15AP6-201ENST00000420703 385 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 SAR1AP4-201ENST00000429225 591 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 AC104332.2-201ENST00000429959 156 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.72□□□□□ -1.81
RHBDL3P58872 MTND4P32-201ENST00000437189 1237 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 AL031667.1-201ENST00000440222 725 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.72□□□□□ -1.81
RHBDL3P58872 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.72□□□□□ -1.81
RHBDL3P58872 WASF1P1-201ENST00000447560 1131 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 HMGN2P10-201ENST00000448085 265 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 AC079448.1-201ENST00000449377 373 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 RNU7-182P-201ENST00000459009 62 ntBASIC3.72□□□□□ -1.81
RHBDL3P58872 RPS26P21-201ENST00000475397 348 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms