Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PEX3P56589 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.73□□□□□ -1.97
PEX3P56589 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PEX3P56589 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PEX3P56589 AC080100.1-201ENST00000624239 5356 ntBASIC2.72□□□□□ -1.97
PEX3P56589 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PEX3P56589 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.72□□□□□ -1.97
PEX3P56589 Y_RNA.51-201ENST00000362725 102 ntBASIC2.72□□□□□ -1.97
PEX3P56589 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PEX3P56589 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PEX3P56589 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.72□□□□□ -1.97
PEX3P56589 RPL23AP32-201ENST00000395315 459 ntBASIC2.72□□□□□ -1.97
PEX3P56589 RNU2-33P-201ENST00000410344 192 ntBASIC2.72□□□□□ -1.97
PEX3P56589 ELOCP17-201ENST00000414751 326 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.72□□□□□ -1.97
PEX3P56589 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.72□□□□□ -1.97
PEX3P56589 AL356867.1-201ENST00000429623 299 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AC010153.1-201ENST00000432862 727 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.72□□□□□ -1.97
PEX3P56589 BNIP3P2-201ENST00000441221 577 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.72□□□□□ -1.97
PEX3P56589 AC009237.8-201ENST00000445492 379 ntBASIC2.72□□□□□ -1.97
PEX3P56589 GAPDHP17-201ENST00000449858 1001 ntBASIC2.72□□□□□ -1.97
PEX3P56589 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PEX3P56589 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.72□□□□□ -1.97
PEX3P56589 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.72□□□□□ -1.97
PEX3P56589 AC133134.1-201ENST00000466800 359 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AC008571.1-201ENST00000467232 300 ntBASIC2.72□□□□□ -1.97
PEX3P56589 MTND1P3-201ENST00000484956 952 ntBASIC2.72□□□□□ -1.97
PEX3P56589 ARL2BPP4-201ENST00000506854 471 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.72□□□□□ -1.97
PEX3P56589 RNU6-826P-201ENST00000516827 104 ntBASIC2.72□□□□□ -1.97
PEX3P56589 RNU6-840P-201ENST00000517275 65 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AP002963.1-201ENST00000530590 184 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.72□□□□□ -1.97
PEX3P56589 RPS3AP4-201ENST00000555161 764 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AMZ2P1-203ENST00000565833 850 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AC010620.2-201ENST00000600135 313 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AC064872.1-201ENST00000604823 1072 ntBASIC2.72□□□□□ -1.97
PEX3P56589 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
PEX3P56589 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.72□□□□□ -1.97
PEX3P56589 AP001506.1-201ENST00000615444 211 ntBASIC2.72□□□□□ -1.97
PEX3P56589 AC027309.3-201ENST00000623419 351 ntBASIC2.72□□□□□ -1.97
PEX3P56589 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.72□□□□□ -1.97
PEX3P56589 AC007785.2-201ENST00000598627 1916 ntBASIC2.72□□□□□ -1.97
PEX3P56589 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
PEX3P56589 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
PEX3P56589 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PEX3P56589 SNORA25.6-201ENST00000364121 118 ntBASIC2.71□□□□□ -1.98
PEX3P56589 RNU6-14P-201ENST00000384630 106 ntBASIC2.71□□□□□ -1.98
PEX3P56589 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PEX3P56589 RPS4XP3-201ENST00000398541 413 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AL359511.1-201ENST00000402970 211 ntBASIC2.71□□□□□ -1.98
PEX3P56589 RNU2-36P-201ENST00000410361 191 ntBASIC2.71□□□□□ -1.98
PEX3P56589 RNU6-1077P-201ENST00000410506 102 ntBASIC2.71□□□□□ -1.98
PEX3P56589 SPA17P1-201ENST00000416656 452 ntBASIC2.71□□□□□ -1.98
PEX3P56589 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.71□□□□□ -1.98
PEX3P56589 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PEX3P56589 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AL353706.1-201ENST00000436728 494 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.71□□□□□ -1.98
PEX3P56589 USP9YP15-201ENST00000442391 422 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AL513328.1-201ENST00000446460 224 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AL590664.1-201ENST00000448065 339 ntBASIC2.71□□□□□ -1.98
PEX3P56589 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.71□□□□□ -1.98
PEX3P56589 AL033528.1-201ENST00000453780 140 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AP000705.1-201ENST00000454567 350 ntBASIC2.71□□□□□ -1.98
PEX3P56589 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PEX3P56589 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.71□□□□□ -1.98
PEX3P56589 RBM43P1-201ENST00000476891 1081 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AC010587.1-201ENST00000505809 469 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.71□□□□□ -1.98
PEX3P56589 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.71□□□□□ -1.98
PEX3P56589 RNU6-927P-201ENST00000516199 100 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AC109329.2-201ENST00000519658 482 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AP001804.3-201ENST00000525146 880 ntBASIC2.71□□□□□ -1.98
PEX3P56589 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PEX3P56589 AC093012.1-202ENST00000549403 582 ntBASIC2.71□□□□□ -1.98
PEX3P56589 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.71□□□□□ -1.98
PEX3P56589 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.71□□□□□ -1.98
PEX3P56589 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.71□□□□□ -1.98
PEX3P56589 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.71□□□□□ -1.98
PEX3P56589 AC119751.7-201ENST00000600494 245 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AC103710.1-201ENST00000610003 901 ntBASIC2.71□□□□□ -1.98
PEX3P56589 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AC006338.1-201ENST00000618453 749 ntBASIC2.71□□□□□ -1.98
PEX3P56589 MTND1P37-201ENST00000636562 264 ntBASIC2.71□□□□□ -1.98
PEX3P56589 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
PEX3P56589 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PEX3P56589 CR848007.1-201ENST00000442354 1699 ntBASIC2.7□□□□□ -1.98
PEX3P56589 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
PEX3P56589 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PEX3P56589 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PEX3P56589 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PEX3P56589 RNU6-741P-201ENST00000383889 107 ntBASIC2.7□□□□□ -1.98
PEX3P56589 SNORA1.3-201ENST00000384676 136 ntBASIC2.7□□□□□ -1.98
PEX3P56589 AL162578.1-201ENST00000406202 378 ntBASIC2.7□□□□□ -1.98
PEX3P56589 RNA5SP38-201ENST00000410750 119 ntBASIC2.7□□□□□ -1.98
PEX3P56589 RNU2-62P-201ENST00000410868 191 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms