Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LIMK1P53667 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.01□□□□□ -1.93
LIMK1P53667 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.01□□□□□ -1.93
LIMK1P53667 AC068135.2-201ENST00000569293 1028 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 AC010546.1-201ENST00000569391 485 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.01□□□□□ -1.93
LIMK1P53667 AC005771.1-201ENST00000585581 349 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.01□□□□□ -1.93
LIMK1P53667 AC103710.2-201ENST00000609912 942 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LIMK1P53667 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 AC034102.8-201ENST00000615146 484 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 AL603839.4-201ENST00000624658 1005 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 AC099654.13-201ENST00000639774 207 ntBASIC3.01□□□□□ -1.93
LIMK1P53667 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.01□□□□□ -1.93
LIMK1P53667 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.01□□□□□ -1.93
LIMK1P53667 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3□□□□□ -1.93
LIMK1P53667 AC096644.4-201ENST00000563417 2912 ntBASIC3□□□□□ -1.93
LIMK1P53667 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LIMK1P53667 ELF2P3-201ENST00000445099 1506 ntBASIC3□□□□□ -1.93
LIMK1P53667 RNU5E-1-201ENST00000362477 120 ntBASIC3□□□□□ -1.93
LIMK1P53667 RNU6-288P-201ENST00000363690 104 ntBASIC3□□□□□ -1.93
LIMK1P53667 Y_RNA.201-201ENST00000364052 96 ntBASIC3□□□□□ -1.93
LIMK1P53667 RPL23AP32-201ENST00000395315 459 ntBASIC3□□□□□ -1.93
LIMK1P53667 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3□□□□□ -1.93
LIMK1P53667 ISCA1P6-201ENST00000427740 390 ntBASIC3□□□□□ -1.93
LIMK1P53667 AC093106.2-201ENST00000428212 385 ntBASIC3□□□□□ -1.93
LIMK1P53667 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3□□□□□ -1.93
LIMK1P53667 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3□□□□□ -1.93
LIMK1P53667 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3□□□□□ -1.93
LIMK1P53667 RNU6-953P-201ENST00000459154 107 ntBASIC3□□□□□ -1.93
LIMK1P53667 RPS15AP34-201ENST00000487776 387 ntBASIC3□□□□□ -1.93
LIMK1P53667 RNU6-143P-201ENST00000516942 93 ntBASIC3□□□□□ -1.93
LIMK1P53667 HMGB1P41-201ENST00000520234 440 ntBASIC3□□□□□ -1.93
LIMK1P53667 SUB1P1-201ENST00000524415 382 ntBASIC3□□□□□ -1.93
LIMK1P53667 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3□□□□□ -1.93
LIMK1P53667 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3□□□□□ -1.93
LIMK1P53667 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3□□□□□ -1.93
LIMK1P53667 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
LIMK1P53667 AC098826.3-201ENST00000603823 466 ntBASIC3□□□□□ -1.93
LIMK1P53667 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3□□□□□ -1.93
LIMK1P53667 AC025594.3-201ENST00000613068 790 ntBASIC3□□□□□ -1.93
LIMK1P53667 AC100793.4-201ENST00000613683 429 ntBASIC3□□□□□ -1.93
LIMK1P53667 AP001506.1-201ENST00000615444 211 ntBASIC3□□□□□ -1.93
LIMK1P53667 AL590808.1-201ENST00000618696 141 ntBASIC3□□□□□ -1.93
LIMK1P53667 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
LIMK1P53667 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.99□□□□□ -1.93
LIMK1P53667 RNU6-511P-201ENST00000363496 107 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 RNU5E-6P-201ENST00000365574 115 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 SNORA20.2-201ENST00000383922 131 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 RNU6-217P-201ENST00000384164 104 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMK1P53667 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.99□□□□□ -1.93
LIMK1P53667 AC093151.1-201ENST00000427711 313 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 TOMM20P4-201ENST00000427861 435 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMK1P53667 GPM6BP2-201ENST00000432046 144 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 AC009296.1-201ENST00000443146 155 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 GPM6BP1-201ENST00000446387 144 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 CECR9-201ENST00000453421 199 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.99□□□□□ -1.93
LIMK1P53667 RPL31P3-201ENST00000458430 332 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 RNU6-956P-201ENST00000458868 103 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 MTCO2P29-201ENST00000465212 189 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 RPL23AP70-201ENST00000483361 460 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 AC113155.1-201ENST00000511141 769 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 RNA5SP217-201ENST00000515959 91 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 RNU6-1092P-201ENST00000516955 87 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 RNA5SP471-201ENST00000516971 106 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 AC107016.2-201ENST00000547968 190 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 AC040904.1-201ENST00000590850 223 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 AC073544.2-201ENST00000601155 540 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 AC004805.2-201ENST00000605382 482 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 AL627309.6-201ENST00000606857 840 ntBASIC2.99□□□□□ -1.93
LIMK1P53667 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LIMK1P53667 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
LIMK1P53667 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LIMK1P53667 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.98□□□□□ -1.93
LIMK1P53667 AL356057.2-201ENST00000403318 432 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 RNU6-195P-201ENST00000411352 109 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.98□□□□□ -1.93
LIMK1P53667 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.98□□□□□ -1.93
LIMK1P53667 AC098614.2-201ENST00000426040 255 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.98□□□□□ -1.93
LIMK1P53667 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.98□□□□□ -1.93
LIMK1P53667 PGBD4P3-201ENST00000440731 581 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 MTATP6P26-201ENST00000445926 662 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.98□□□□□ -1.93
LIMK1P53667 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.98□□□□□ -1.93
LIMK1P53667 SNORD42A-201ENST00000459584 64 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 AC128713.1-201ENST00000471495 306 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
LIMK1P53667 RPS3AP4-201ENST00000555161 764 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.98□□□□□ -1.93
LIMK1P53667 AC110760.3-201ENST00000598794 467 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 AC119751.7-201ENST00000600494 245 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 AL355877.2-201ENST00000603670 358 ntBASIC2.98□□□□□ -1.93
LIMK1P53667 AC007363.1-201ENST00000604736 620 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms