Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC099669.2-201ENST00000616549 437 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF144AP50876 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF144AP50876 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
RNF144AP50876 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF144AP50876 AL592182.3-201ENST00000642132 3304 ntBASIC4.87□□□□□ -1.63
RNF144AP50876 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF144AP50876 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
RNF144AP50876 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF144AP50876 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
RNF144AP50876 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF144AP50876 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF144AP50876 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RNF144AP50876 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF144AP50876 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF144AP50876 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RNF144AP50876 RNU1-19P-201ENST00000363306 165 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 Y_RNA.319-201ENST00000365138 92 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 RNU6-1145P-201ENST00000384246 107 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 RNU6-72P-201ENST00000384285 79 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 MIR329-1-201ENST00000385028 80 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 RNA5SP339-201ENST00000390987 122 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF144AP50876 CTSL3P-202ENST00000412179 788 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF144AP50876 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF144AP50876 AC005042.3-201ENST00000453230 174 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.86□□□□□ -1.63
RNF144AP50876 RPL31P13-201ENST00000484151 370 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 RPS27P26-201ENST00000494583 239 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 AL136038.1-201ENST00000497246 351 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 RNU6-971P-201ENST00000516920 106 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF144AP50876 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF144AP50876 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF144AP50876 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.86□□□□□ -1.63
RNF144AP50876 AC006349.1-201ENST00000555526 235 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF144AP50876 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF144AP50876 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 AC027309.3-201ENST00000623419 351 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 SCARNA4-202ENST00000625402 129 ntBASIC4.86□□□□□ -1.63
RNF144AP50876 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RNF144AP50876 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RNF144AP50876 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RNF144AP50876 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RNF144AP50876 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.86□□□□□ -1.63
RNF144AP50876 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF144AP50876 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF144AP50876 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RNF144AP50876 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF144AP50876 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RNF144AP50876 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF144AP50876 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.85□□□□□ -1.63
RNF144AP50876 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF144AP50876 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF144AP50876 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF144AP50876 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF144AP50876 DEFB108F-201ENST00000344638 222 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 Y_RNA.75-201ENST00000362927 97 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 RNU6-213P-201ENST00000384051 104 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 MIR589-201ENST00000385238 99 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 AC009804.1-201ENST00000400949 179 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.85□□□□□ -1.63
RNF144AP50876 Z85995.1-201ENST00000415547 335 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 RPL17P36-201ENST00000420302 549 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 AC007919.1-201ENST00000429380 217 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 AL512844.2-201ENST00000433990 593 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 AC005154.2-201ENST00000438110 379 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 AL137159.1-201ENST00000452808 512 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF144AP50876 SCARNA15.2-201ENST00000516409 127 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 SUMO2P18-201ENST00000518873 252 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF144AP50876 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF144AP50876 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF144AP50876 MIR6768-201ENST00000610734 72 ntBASIC4.85□□□□□ -1.63
RNF144AP50876 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF144AP50876 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
RNF144AP50876 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.85□□□□□ -1.63
RNF144AP50876 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF144AP50876 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF144AP50876 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF144AP50876 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 FTLP6-201ENST00000355274 422 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 Y_RNA.71-201ENST00000362892 104 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 RNU4-80P-201ENST00000363200 141 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 RNA5SP197-201ENST00000363357 119 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 RNU6-741P-201ENST00000383889 107 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 SNORA29-201ENST00000384183 140 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF144AP50876 AL391361.1-201ENST00000405580 489 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 OR3A2-201ENST00000408891 1076 ntBASIC4.84□□□□□ -1.63
RNF144AP50876 AC079355.1-201ENST00000421770 223 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms