Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX2-1P43699 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.77□□□□□ -1.97
NKX2-1P43699 AC067959.1-201ENST00000604334 379 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AC008536.2-201ENST00000607284 349 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AC022893.3-201ENST00000607665 437 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 AL161629.2-201ENST00000615347 275 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 U4.6-201ENST00000621618 127 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX2-1P43699 AL079305.1-201ENST00000623159 3008 ntBASIC2.77□□□□□ -1.97
NKX2-1P43699 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.77□□□□□ -1.97
NKX2-1P43699 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-1P43699 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-1P43699 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-1P43699 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
NKX2-1P43699 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-1P43699 RNA5SP139-201ENST00000364340 117 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 RNU6-512P-201ENST00000364438 103 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 RNU1-64P-201ENST00000365443 163 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 Y_RNA.576-201ENST00000384781 102 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 RNU6-903P-201ENST00000391270 109 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 RN7SKP156-201ENST00000410308 342 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 RNA5SP44-201ENST00000410446 133 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.76□□□□□ -1.97
NKX2-1P43699 RPL26P27-201ENST00000414397 437 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 HSPE1P1-201ENST00000421494 318 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.76□□□□□ -1.97
NKX2-1P43699 RPL7P46-201ENST00000425129 740 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AL451062.2-201ENST00000427515 271 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 SRIP2-201ENST00000428470 166 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 RPS29P7-201ENST00000439662 171 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.76□□□□□ -1.97
NKX2-1P43699 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.76□□□□□ -1.97
NKX2-1P43699 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-1P43699 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.76□□□□□ -1.97
NKX2-1P43699 CECR9-201ENST00000453421 199 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 CACYBPP2-201ENST00000453625 678 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AL031183.1-201ENST00000457667 207 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 RPL21P8-201ENST00000465083 535 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 RPL31P58-201ENST00000469001 379 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AC103987.1-201ENST00000473394 348 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AC068587.1-201ENST00000483613 781 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.76□□□□□ -1.97
NKX2-1P43699 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.76□□□□□ -1.97
NKX2-1P43699 RNA5SP380-201ENST00000517190 98 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-1P43699 NACAP3-201ENST00000552100 481 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.76□□□□□ -1.97
NKX2-1P43699 MTCO3P23-201ENST00000561363 289 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 MIR3160-1-201ENST00000577972 85 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 RN7SL703P-201ENST00000578485 302 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.76□□□□□ -1.97
NKX2-1P43699 AC008945.2-201ENST00000606056 604 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 DISC2.1-201ENST00000612827 205 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AC012409.4-201ENST00000612923 249 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 AC068724.3-201ENST00000625906 87 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 U2.21-201ENST00000637295 81 ntBASIC2.76□□□□□ -1.97
NKX2-1P43699 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
NKX2-1P43699 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
NKX2-1P43699 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-1P43699 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
NKX2-1P43699 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
NKX2-1P43699 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-1P43699 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX2-1P43699 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-1P43699 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-1P43699 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-1P43699 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-1P43699 RNU6-451P-201ENST00000362921 107 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 Y_RNA.88-201ENST00000363029 99 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 RNU6-288P-201ENST00000363690 104 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AC068050.1-201ENST00000394891 380 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 RNU4-46P-201ENST00000410818 138 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 RNU6-193P-201ENST00000410977 107 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AL365496.1-201ENST00000426885 215 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 CST9LP2-201ENST00000437612 320 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 RPL21P133-201ENST00000443666 476 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 MTATP6P7-201ENST00000453315 681 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AC104472.2-201ENST00000469035 601 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AC108078.2-201ENST00000510750 236 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.75□□□□□ -1.97
NKX2-1P43699 LRRC34P2-201ENST00000514850 553 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 RNU6-718P-201ENST00000516166 105 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 RN7SKP21-201ENST00000516503 220 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 RNU6-358P-201ENST00000516564 75 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 RNU6-914P-201ENST00000516749 109 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 RNA5SP165-201ENST00000517142 115 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-1P43699 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.75□□□□□ -1.97
NKX2-1P43699 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.75□□□□□ -1.97
NKX2-1P43699 AC118273.2-201ENST00000532092 465 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-1P43699 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
NKX2-1P43699 ADI1P3-201ENST00000549509 470 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.75□□□□□ -1.97
NKX2-1P43699 AL391261.3-201ENST00000557194 520 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AC234778.2-201ENST00000566241 354 ntBASIC2.75□□□□□ -1.97
NKX2-1P43699 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NKX2-1P43699 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.75□□□□□ -1.97
NKX2-1P43699 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX2-1P43699 AC006557.5-201ENST00000603126 811 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms