Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 USP9YP15-201ENST00000442391 422 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 RNU6-775P-201ENST00000459318 96 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 RPL37P6-201ENST00000460682 294 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 AC021382.1-201ENST00000483523 359 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CASQ1P31415 AC008628.1-201ENST00000508663 265 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 AC121161.1-201ENST00000510606 652 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 RNU6-703P-201ENST00000516946 107 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.89□□□□□ -2.11
CASQ1P31415 AC079598.5-201ENST00000547460 117 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.89□□□□□ -2.11
CASQ1P31415 AC122134.1-202ENST00000569111 1201 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.89□□□□□ -2.11
CASQ1P31415 AC005000.2-201ENST00000605468 310 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 AC108479.2-201ENST00000617314 601 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 AL445264.1-201ENST00000621719 171 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 AL118508.4-201ENST00000624142 1176 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 AC092192.1-201ENST00000633154 1018 ntBASIC1.89□□□□□ -2.11
CASQ1P31415 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
CASQ1P31415 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
CASQ1P31415 RNU6-432P-201ENST00000384196 109 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 AL079342.1-201ENST00000401460 267 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 AC127391.1-201ENST00000411737 98 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.88□□□□□ -2.11
CASQ1P31415 AL672167.3-201ENST00000465951 960 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 AC018868.1-201ENST00000491307 315 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.88□□□□□ -2.11
CASQ1P31415 AC096745.1-201ENST00000509945 370 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
CASQ1P31415 AC107393.1-201ENST00000512403 346 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.88□□□□□ -2.11
CASQ1P31415 SNORA44.1-201ENST00000517031 108 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.88□□□□□ -2.11
CASQ1P31415 AP003497.1-201ENST00000528472 562 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.88□□□□□ -2.11
CASQ1P31415 PSMA3P-201ENST00000555485 635 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.88□□□□□ -2.11
CASQ1P31415 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.88□□□□□ -2.11
CASQ1P31415 AC073544.2-201ENST00000601155 540 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 AC091057.3-201ENST00000602684 733 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 MIR92B-201ENST00000607575 96 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 CDR1-202ENST00000625883 1485 ntBASIC1.88□□□□□ -2.11
CASQ1P31415 AL161781.1-201ENST00000354277 403 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 U8.3-201ENST00000363321 132 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 RNU6-1207P-201ENST00000384343 107 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 SNORD65.1-201ENST00000390889 71 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 CISD1P1-201ENST00000393907 327 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.87□□□□□ -2.11
CASQ1P31415 UBE2FP1-201ENST00000416536 447 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.87□□□□□ -2.11
CASQ1P31415 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.87□□□□□ -2.11
CASQ1P31415 GPM6BP2-201ENST00000432046 144 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 RPL36AP53-201ENST00000432891 316 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.87□□□□□ -2.11
CASQ1P31415 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 MTND2P20-201ENST00000440805 661 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 GPM6BP1-201ENST00000446387 144 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.87□□□□□ -2.11
CASQ1P31415 RNU1-98P-201ENST00000458992 160 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 RNA5SP57-201ENST00000459463 123 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 AC112771.1-201ENST00000463581 102 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 AC079203.1-201ENST00000487972 404 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.87□□□□□ -2.11
CASQ1P31415 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.87□□□□□ -2.11
CASQ1P31415 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.87□□□□□ -2.11
CASQ1P31415 AL390838.2-201ENST00000602394 274 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 AL713866.2-201ENST00000603579 219 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.87□□□□□ -2.11
CASQ1P31415 AC003001.2-201ENST00000616294 831 ntBASIC1.87□□□□□ -2.11
CASQ1P31415 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.87□□□□□ -2.11
CASQ1P31415 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.87□□□□□ -2.11
CASQ1P31415 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.87□□□□□ -2.11
CASQ1P31415 MTND4P21-201ENST00000453886 1357 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 AL136360.1-201ENST00000503377 1900 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CASQ1P31415 RNU6-114P-201ENST00000384704 105 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 MIR491-201ENST00000384877 84 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CASQ1P31415 AL356320.1-201ENST00000429616 163 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
CASQ1P31415 RPS15AP9-201ENST00000439856 381 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.86□□□□□ -2.11
CASQ1P31415 AC092001.1-201ENST00000453012 261 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CASQ1P31415 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.86□□□□□ -2.11
CASQ1P31415 RNU6-390P-201ENST00000516259 103 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 AC104581.2-201ENST00000572227 430 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.86□□□□□ -2.11
CASQ1P31415 BBIP1P1-201ENST00000602999 279 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.86□□□□□ -2.11
CASQ1P31415 AC099842.1-201ENST00000619919 596 ntBASIC1.86□□□□□ -2.11
CASQ1P31415 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.86□□□□□ -2.11
CASQ1P31415 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.86□□□□□ -2.11
CASQ1P31415 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.86□□□□□ -2.11
CASQ1P31415 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
CASQ1P31415 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CASQ1P31415 NACAP2-201ENST00000318548 624 ntBASIC1.85□□□□□ -2.11
CASQ1P31415 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CASQ1P31415 RNA5SP465-201ENST00000391195 109 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms