Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXA11P31270 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXA11P31270 AC093278.1-201ENST00000494700 600 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 AC010265.1-201ENST00000513509 211 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA11P31270 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA11P31270 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXA11P31270 AC098848.2-201ENST00000588023 330 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 GLUD1P4-201ENST00000590914 418 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXA11P31270 AC044792.1-201ENST00000593294 196 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 uc_338.25-201ENST00000613756 156 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA11P31270 AP001486.3-201ENST00000615334 372 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 MIR6076-201ENST00000617521 113 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 AC007742.2-201ENST00000618226 398 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 MTND1P37-201ENST00000636562 264 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA11P31270 AC004972.1-201ENST00000623934 2209 ntBASIC3.46□□□□□ -1.86
HOXA11P31270 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA11P31270 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA11P31270 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA11P31270 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA11P31270 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA11P31270 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HOXA11P31270 OR1S2-201ENST00000302592 978 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 HSPE1P11-201ENST00000339579 310 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 U3.11-201ENST00000364476 212 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 Y_RNA.255-201ENST00000364581 97 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 RNU4-48P-201ENST00000365559 182 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HOXA11P31270 SAR1AP2-201ENST00000392696 594 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 RNU6-1068P-201ENST00000410958 103 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 RPL30P2-201ENST00000414021 291 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 RPS15AP12-201ENST00000419498 388 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 SDCBPP3-201ENST00000419629 891 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA11P31270 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA11P31270 MTATP6P4-201ENST00000427725 675 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA11P31270 RPS20P5-201ENST00000434808 360 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 AC004866.2-201ENST00000438285 481 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 GMFBP1-201ENST00000467831 427 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 AC006483.1-201ENST00000487308 313 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 MTCO3P9-201ENST00000506989 781 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA11P31270 AC105417.1-201ENST00000514691 285 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 AC008885.1-201ENST00000514930 301 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 SNORA31.1-201ENST00000515993 133 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 SNORA31.5-201ENST00000516190 133 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXA11P31270 PSMA2P1-201ENST00000526365 646 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 OR4R1P-201ENST00000529879 463 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA11P31270 AC106782.4-201ENST00000568264 210 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 RPS3AP23-202ENST00000574601 686 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXA11P31270 AC011712.1-201ENST00000588959 234 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 AC013553.2-201ENST00000604244 589 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA11P31270 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA11P31270 AC007038.2-201ENST00000608095 740 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA11P31270 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
HOXA11P31270 MAPK10-362ENST00000641864 4484 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA11P31270 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.45□□□□□ -1.86
HOXA11P31270 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA11P31270 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA11P31270 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXA11P31270 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXA11P31270 RNU4-73P-201ENST00000363164 141 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 RNY3P13-201ENST00000365542 102 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 Y_RNA.367-201ENST00000365544 101 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
HOXA11P31270 SNORA54-201ENST00000384281 123 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 MIR558-201ENST00000384920 94 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXA11P31270 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA11P31270 UBA52P6-201ENST00000399822 382 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 RNU6-55P-201ENST00000411092 107 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 RNU6-954P-201ENST00000411355 107 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 RHEBP3-201ENST00000411920 351 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA11P31270 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXA11P31270 UBE2D3P2-201ENST00000424409 445 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 MTCO1P39-201ENST00000426148 480 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 MED13P1-201ENST00000428342 171 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 CBWD4P-201ENST00000445695 655 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXA11P31270 RNU7-63P-201ENST00000459054 62 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AC233702.1-201ENST00000482905 502 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AL163973.1-201ENST00000484753 577 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXA11P31270 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA11P31270 AC011979.2-201ENST00000527568 352 ntBASIC3.44□□□□□ -1.86
HOXA11P31270 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA11P31270 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXA11P31270 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms