Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.182-201ENST00000363880 111 ntBASIC5.22□□□□□ -1.57
VARSP26640 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
VARSP26640 RNU6-171P-201ENST00000384354 107 ntBASIC5.22□□□□□ -1.57
VARSP26640 SNORA40.19-201ENST00000390846 128 ntBASIC5.22□□□□□ -1.57
VARSP26640 AL645733.1-201ENST00000402250 217 ntBASIC5.22□□□□□ -1.57
VARSP26640 RNU2-52P-201ENST00000410680 190 ntBASIC5.22□□□□□ -1.57
VARSP26640 SRSF1P1-201ENST00000424058 520 ntBASIC5.22□□□□□ -1.57
VARSP26640 RPL19P16-201ENST00000433839 588 ntBASIC5.22□□□□□ -1.57
VARSP26640 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.22□□□□□ -1.57
VARSP26640 CYCSP32-201ENST00000440548 321 ntBASIC5.22□□□□□ -1.57
VARSP26640 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC5.22□□□□□ -1.57
VARSP26640 AL590399.6-201ENST00000446396 307 ntBASIC5.22□□□□□ -1.57
VARSP26640 AL137159.1-201ENST00000452808 512 ntBASIC5.22□□□□□ -1.57
VARSP26640 AC092754.1-201ENST00000472975 479 ntBASIC5.22□□□□□ -1.57
VARSP26640 RN7SL826P-201ENST00000479724 288 ntBASIC5.22□□□□□ -1.57
VARSP26640 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.22□□□□□ -1.57
VARSP26640 RN7SL447P-201ENST00000494711 245 ntBASIC5.22□□□□□ -1.57
VARSP26640 YWHAEP4-201ENST00000505390 198 ntBASIC5.22□□□□□ -1.57
VARSP26640 BTF3L4P4-201ENST00000506381 449 ntBASIC5.22□□□□□ -1.57
VARSP26640 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.22□□□□□ -1.57
VARSP26640 SCARNA16.4-201ENST00000516956 187 ntBASIC5.22□□□□□ -1.57
VARSP26640 SNORA31.19-201ENST00000517079 126 ntBASIC5.22□□□□□ -1.57
VARSP26640 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.22□□□□□ -1.57
VARSP26640 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.22□□□□□ -1.57
VARSP26640 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.22□□□□□ -1.57
VARSP26640 AC040958.1-201ENST00000561102 201 ntBASIC5.22□□□□□ -1.57
VARSP26640 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.22□□□□□ -1.57
VARSP26640 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.22□□□□□ -1.57
VARSP26640 MIR4782-201ENST00000577987 79 ntBASIC5.22□□□□□ -1.57
VARSP26640 MIR5695-201ENST00000579717 85 ntBASIC5.22□□□□□ -1.57
VARSP26640 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.22□□□□□ -1.57
VARSP26640 AC068831.7-201ENST00000616954 363 ntBASIC5.22□□□□□ -1.57
VARSP26640 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.22□□□□□ -1.57
VARSP26640 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.22□□□□□ -1.57
VARSP26640 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VARSP26640 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
VARSP26640 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.21□□□□□ -1.57
VARSP26640 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.21□□□□□ -1.57
VARSP26640 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VARSP26640 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARSP26640 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARSP26640 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
VARSP26640 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VARSP26640 OR1L6-202ENST00000373684 1044 ntBASIC5.21□□□□□ -1.58
VARSP26640 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
VARSP26640 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.21□□□□□ -1.58
VARSP26640 CR769767.1-201ENST00000436337 346 ntBASIC5.21□□□□□ -1.58
VARSP26640 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.21□□□□□ -1.58
VARSP26640 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.21□□□□□ -1.58
VARSP26640 RN7SL97P-201ENST00000486780 299 ntBASIC5.21□□□□□ -1.58
VARSP26640 RPL23AP49-201ENST00000492925 468 ntBASIC5.21□□□□□ -1.58
VARSP26640 AC097462.2-201ENST00000504623 481 ntBASIC5.21□□□□□ -1.58
VARSP26640 SUMO2P18-201ENST00000518873 252 ntBASIC5.21□□□□□ -1.58
VARSP26640 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.21□□□□□ -1.58
VARSP26640 AC112693.2-201ENST00000556538 232 ntBASIC5.21□□□□□ -1.58
VARSP26640 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.21□□□□□ -1.58
VARSP26640 AC005176.2-201ENST00000596933 147 ntBASIC5.21□□□□□ -1.58
VARSP26640 AC000068.2-201ENST00000608816 460 ntBASIC5.21□□□□□ -1.58
VARSP26640 AC244107.2-201ENST00000611773 76 ntBASIC5.21□□□□□ -1.58
VARSP26640 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
VARSP26640 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARSP26640 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VARSP26640 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
VARSP26640 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.21□□□□□ -1.58
VARSP26640 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARSP26640 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.21□□□□□ -1.58
VARSP26640 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARSP26640 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
VARSP26640 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
VARSP26640 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
VARSP26640 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VARSP26640 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
VARSP26640 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
VARSP26640 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.2□□□□□ -1.58
VARSP26640 RNU6-78P-201ENST00000362897 107 ntBASIC5.2□□□□□ -1.58
VARSP26640 Y_RNA.75-201ENST00000362927 97 ntBASIC5.2□□□□□ -1.58
VARSP26640 RNU6-1286P-201ENST00000383871 107 ntBASIC5.2□□□□□ -1.58
VARSP26640 SNORD116-14-201ENST00000383894 92 ntBASIC5.2□□□□□ -1.58
VARSP26640 SNORD116-17-201ENST00000383929 92 ntBASIC5.2□□□□□ -1.58
VARSP26640 RNU6-166P-201ENST00000384371 107 ntBASIC5.2□□□□□ -1.58
VARSP26640 SNORD116-15-201ENST00000384445 92 ntBASIC5.2□□□□□ -1.58
VARSP26640 SNORD116-20-201ENST00000384529 92 ntBASIC5.2□□□□□ -1.58
VARSP26640 SNORD116-19-201ENST00000384729 92 ntBASIC5.2□□□□□ -1.58
VARSP26640 RNU6-837P-201ENST00000391056 108 ntBASIC5.2□□□□□ -1.58
VARSP26640 SNORA40C-201ENST00000391285 128 ntBASIC5.2□□□□□ -1.58
VARSP26640 RNU6-1001P-201ENST00000411265 100 ntBASIC5.2□□□□□ -1.58
VARSP26640 MTND4LP9-201ENST00000427694 174 ntBASIC5.2□□□□□ -1.58
VARSP26640 AC124916.1-201ENST00000444020 547 ntBASIC5.2□□□□□ -1.58
VARSP26640 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.2□□□□□ -1.58
VARSP26640 RNU6-1234P-201ENST00000516877 103 ntBASIC5.2□□□□□ -1.58
VARSP26640 AC027369.5-201ENST00000533838 755 ntBASIC5.2□□□□□ -1.58
VARSP26640 AL391261.3-201ENST00000557194 520 ntBASIC5.2□□□□□ -1.58
VARSP26640 AC055872.1-201ENST00000570978 278 ntBASIC5.2□□□□□ -1.58
VARSP26640 MIR4646-201ENST00000580775 63 ntBASIC5.2□□□□□ -1.58
VARSP26640 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.2□□□□□ -1.58
VARSP26640 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.2□□□□□ -1.58
VARSP26640 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.2□□□□□ -1.58
VARSP26640 AC074101.1-201ENST00000637861 241 ntBASIC5.2□□□□□ -1.58
VARSP26640 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
VARSP26640 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 901.6 ms