Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 MIR3609-201ENST00000582661 80 ntBASIC4.09□□□□□ -1.75
ATF3P18847 AL161798.1-201ENST00000604630 131 ntBASIC4.09□□□□□ -1.75
ATF3P18847 AC015813.4-201ENST00000610469 179 ntBASIC4.09□□□□□ -1.75
ATF3P18847 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.09□□□□□ -1.75
ATF3P18847 AC099654.12-201ENST00000639868 649 ntBASIC4.09□□□□□ -1.75
ATF3P18847 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
ATF3P18847 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
ATF3P18847 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATF3P18847 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ATF3P18847 UBE2L2-201ENST00000254302 429 ntBASIC4.08□□□□□ -1.76
ATF3P18847 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.08□□□□□ -1.76
ATF3P18847 RNU6-179P-201ENST00000363350 107 ntBASIC4.08□□□□□ -1.76
ATF3P18847 Y_RNA.245-201ENST00000364493 95 ntBASIC4.08□□□□□ -1.76
ATF3P18847 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATF3P18847 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATF3P18847 RNU6-1077P-201ENST00000410506 102 ntBASIC4.08□□□□□ -1.76
ATF3P18847 RNU4-55P-201ENST00000410731 137 ntBASIC4.08□□□□□ -1.76
ATF3P18847 AC007390.1-201ENST00000415722 356 ntBASIC4.08□□□□□ -1.76
ATF3P18847 MTATP6P18-201ENST00000417994 673 ntBASIC4.08□□□□□ -1.76
ATF3P18847 MTND5P17-201ENST00000418405 1603 ntBASIC4.08□□□□□ -1.76
ATF3P18847 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.08□□□□□ -1.76
ATF3P18847 ARL5AP4-201ENST00000430731 512 ntBASIC4.08□□□□□ -1.76
ATF3P18847 HMGB3P11-201ENST00000440127 604 ntBASIC4.08□□□□□ -1.76
ATF3P18847 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.08□□□□□ -1.76
ATF3P18847 RPL9P6-201ENST00000492764 598 ntBASIC4.08□□□□□ -1.76
ATF3P18847 RNA5SP471-201ENST00000516971 106 ntBASIC4.08□□□□□ -1.76
ATF3P18847 MYL12AP1-201ENST00000518490 515 ntBASIC4.08□□□□□ -1.76
ATF3P18847 FAM92A1P1-201ENST00000528023 890 ntBASIC4.08□□□□□ -1.76
ATF3P18847 OR4R1P-201ENST00000529879 463 ntBASIC4.08□□□□□ -1.76
ATF3P18847 OR5B19P-201ENST00000531766 928 ntBASIC4.08□□□□□ -1.76
ATF3P18847 AL359212.1-201ENST00000556608 614 ntBASIC4.08□□□□□ -1.76
ATF3P18847 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.08□□□□□ -1.76
ATF3P18847 HSPE1P7-201ENST00000604681 321 ntBASIC4.08□□□□□ -1.76
ATF3P18847 AC007684.1-201ENST00000609671 477 ntBASIC4.08□□□□□ -1.76
ATF3P18847 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
ATF3P18847 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.08□□□□□ -1.76
ATF3P18847 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ATF3P18847 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATF3P18847 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.07□□□□□ -1.76
ATF3P18847 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATF3P18847 Y_RNA.1-201ENST00000352915 104 ntBASIC4.07□□□□□ -1.76
ATF3P18847 Y_RNA.41-201ENST00000362646 102 ntBASIC4.07□□□□□ -1.76
ATF3P18847 MIR1-2-201ENST00000384961 85 ntBASIC4.07□□□□□ -1.76
ATF3P18847 RNA5SP38-201ENST00000410750 119 ntBASIC4.07□□□□□ -1.76
ATF3P18847 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF3P18847 AL592148.1-201ENST00000413568 445 ntBASIC4.07□□□□□ -1.76
ATF3P18847 BMS1P22-201ENST00000414726 313 ntBASIC4.07□□□□□ -1.76
ATF3P18847 MRPL50P2-201ENST00000416821 482 ntBASIC4.07□□□□□ -1.76
ATF3P18847 AL109913.1-201ENST00000421173 514 ntBASIC4.07□□□□□ -1.76
ATF3P18847 ZNF863P-201ENST00000426746 417 ntBASIC4.07□□□□□ -1.76
ATF3P18847 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.07□□□□□ -1.76
ATF3P18847 RPL7P5-201ENST00000471472 736 ntBASIC4.07□□□□□ -1.76
ATF3P18847 AC090543.2-201ENST00000483963 348 ntBASIC4.07□□□□□ -1.76
ATF3P18847 AC108078.2-201ENST00000510750 236 ntBASIC4.07□□□□□ -1.76
ATF3P18847 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.07□□□□□ -1.76
ATF3P18847 AC234778.2-201ENST00000566241 354 ntBASIC4.07□□□□□ -1.76
ATF3P18847 MIR4425-201ENST00000580572 84 ntBASIC4.07□□□□□ -1.76
ATF3P18847 AC024619.4-201ENST00000580924 316 ntBASIC4.07□□□□□ -1.76
ATF3P18847 Z84480.1-201ENST00000605131 311 ntBASIC4.07□□□□□ -1.76
ATF3P18847 XIST_intron.1-201ENST00000619444 68 ntBASIC4.07□□□□□ -1.76
ATF3P18847 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.07□□□□□ -1.76
ATF3P18847 U6.98-201ENST00000637157 84 ntBASIC4.07□□□□□ -1.76
ATF3P18847 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATF3P18847 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.07□□□□□ -1.76
ATF3P18847 AC091152.2-201ENST00000591628 2569 ntBASIC4.07□□□□□ -1.76
ATF3P18847 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.06□□□□□ -1.76
ATF3P18847 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATF3P18847 RNU6-1120P-201ENST00000362988 108 ntBASIC4.06□□□□□ -1.76
ATF3P18847 Y_RNA.159-201ENST00000363674 87 ntBASIC4.06□□□□□ -1.76
ATF3P18847 RNU6-217P-201ENST00000384164 104 ntBASIC4.06□□□□□ -1.76
ATF3P18847 SNORA24.1-201ENST00000384401 135 ntBASIC4.06□□□□□ -1.76
ATF3P18847 RNU6-1035P-201ENST00000384477 107 ntBASIC4.06□□□□□ -1.76
ATF3P18847 MIR454-201ENST00000390180 115 ntBASIC4.06□□□□□ -1.76
ATF3P18847 RNU6-387P-201ENST00000411331 105 ntBASIC4.06□□□□□ -1.76
ATF3P18847 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATF3P18847 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.06□□□□□ -1.76
ATF3P18847 SDCBPP3-201ENST00000419629 891 ntBASIC4.06□□□□□ -1.76
ATF3P18847 ISCA1P1-201ENST00000426679 387 ntBASIC4.06□□□□□ -1.76
ATF3P18847 MTCO2P19-201ENST00000427513 598 ntBASIC4.06□□□□□ -1.76
ATF3P18847 AL591212.2-201ENST00000433923 257 ntBASIC4.06□□□□□ -1.76
ATF3P18847 MTND4P25-201ENST00000441039 533 ntBASIC4.06□□□□□ -1.76
ATF3P18847 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATF3P18847 RPL37P4-201ENST00000448908 268 ntBASIC4.06□□□□□ -1.76
ATF3P18847 AC021205.2-201ENST00000480069 347 ntBASIC4.06□□□□□ -1.76
ATF3P18847 RPL39P36-201ENST00000490784 156 ntBASIC4.06□□□□□ -1.76
ATF3P18847 RNA5SP24-201ENST00000516478 95 ntBASIC4.06□□□□□ -1.76
ATF3P18847 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.06□□□□□ -1.76
ATF3P18847 AL391646.1-201ENST00000603860 190 ntBASIC4.06□□□□□ -1.76
ATF3P18847 AL158209.2-201ENST00000619266 216 ntBASIC4.06□□□□□ -1.76
ATF3P18847 AC093648.1-201ENST00000623546 606 ntBASIC4.06□□□□□ -1.76
ATF3P18847 AC064859.1-201ENST00000624741 174 ntBASIC4.06□□□□□ -1.76
ATF3P18847 AC005609.4-201ENST00000625071 447 ntBASIC4.06□□□□□ -1.76
ATF3P18847 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATF3P18847 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATF3P18847 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATF3P18847 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATF3P18847 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATF3P18847 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.05□□□□□ -1.76
ATF3P18847 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ATF3P18847 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms