Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MTND4P25-201ENST00000441039 533 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.89□□□□□ -1.95
PDGFRAP16234 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.89□□□□□ -1.95
PDGFRAP16234 RN7SL499P-201ENST00000481141 276 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 RPS27AP10-201ENST00000496103 208 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AC026801.1-201ENST00000497178 464 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.89□□□□□ -1.95
PDGFRAP16234 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.89□□□□□ -1.95
PDGFRAP16234 AC113155.1-201ENST00000511141 769 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 RN7SKP40-201ENST00000517211 242 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.89□□□□□ -1.95
PDGFRAP16234 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDGFRAP16234 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDGFRAP16234 NACAP3-201ENST00000552100 481 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 BNIP3P9-201ENST00000603714 553 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AC121247.2-201ENST00000604776 136 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AC068276.1-201ENST00000605793 379 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AP002360.4-201ENST00000606980 481 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 AC008147.4-201ENST00000617570 1204 ntBASIC2.89□□□□□ -1.95
PDGFRAP16234 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDGFRAP16234 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.89□□□□□ -1.95
PDGFRAP16234 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PDGFRAP16234 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFRAP16234 ELF2P3-201ENST00000445099 1506 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AC110491.1-201ENST00000562191 2010 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
PDGFRAP16234 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
PDGFRAP16234 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 RNU6-288P-201ENST00000363690 104 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AL512633.1-201ENST00000399931 655 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AL138827.1-201ENST00000402666 306 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 SNORD88.1-201ENST00000408684 91 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 RPS3AP3-201ENST00000411933 242 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 RPL7P37-201ENST00000425095 738 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AC098614.2-201ENST00000426040 255 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AC093106.2-201ENST00000428212 385 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 RPS15AP5-201ENST00000436276 388 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.88□□□□□ -1.95
PDGFRAP16234 AC098831.1-201ENST00000440661 216 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.88□□□□□ -1.95
PDGFRAP16234 RPS15AP27-201ENST00000449183 343 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.88□□□□□ -1.95
PDGFRAP16234 RNA5SP269-201ENST00000459032 137 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 RPL31P41-201ENST00000477967 372 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AC126182.1-201ENST00000478134 357 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.88□□□□□ -1.95
PDGFRAP16234 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.88□□□□□ -1.95
PDGFRAP16234 RNU6-703P-201ENST00000516946 107 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 RNU2-46P-201ENST00000517038 113 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AC060788.1-201ENST00000521318 469 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFRAP16234 AC079600.2-201ENST00000550076 130 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.88□□□□□ -1.95
PDGFRAP16234 AC010546.1-201ENST00000569391 485 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AC103810.1-201ENST00000579873 453 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFRAP16234 ELOCP29-201ENST00000588193 334 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AL355598.1-201ENST00000604169 202 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 Z94722.1-201ENST00000604328 474 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 AC107871.2-201ENST00000612894 502 ntBASIC2.88□□□□□ -1.95
PDGFRAP16234 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PDGFRAP16234 AC073343.1-201ENST00000328239 651 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PDGFRAP16234 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
PDGFRAP16234 RNU6-946P-201ENST00000383878 107 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 AL590004.2-201ENST00000404787 371 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFRAP16234 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFRAP16234 HMGN1P14-201ENST00000412459 517 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFRAP16234 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.87□□□□□ -1.95
PDGFRAP16234 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFRAP16234 AC007283.2-201ENST00000424739 197 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 MTATP6P17-201ENST00000431030 672 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFRAP16234 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.87□□□□□ -1.95
PDGFRAP16234 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFRAP16234 RPS27AP8-201ENST00000452665 445 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 MTATP6P7-201ENST00000453315 681 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 SNRPGP9-201ENST00000456025 225 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 AC103975.1-201ENST00000482506 483 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 RNU6-677P-201ENST00000516914 101 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 RNU6-143P-201ENST00000516942 93 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFRAP16234 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.87□□□□□ -1.95
PDGFRAP16234 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.87□□□□□ -1.95
PDGFRAP16234 AC012414.6-201ENST00000568241 401 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFRAP16234 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.87□□□□□ -1.95
PDGFRAP16234 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.87□□□□□ -1.95
PDGFRAP16234 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.87□□□□□ -1.95
PDGFRAP16234 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
PDGFRAP16234 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
PDGFRAP16234 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PDGFRAP16234 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFRAP16234 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.86□□□□□ -1.95
PDGFRAP16234 AL355596.1-201ENST00000565399 3996 ntBASIC2.86□□□□□ -1.95
PDGFRAP16234 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFRAP16234 FGF7P2-201ENST00000332473 296 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms