Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.36□□□□□ -2.35
VCANP13611 AL442644.1-201ENST00000454390 3105 ntBASIC0.36□□□□□ -2.35
VCANP13611 AL136520.1-201ENST00000600311 1322 ntBASIC0.36□□□□□ -2.35
VCANP13611 AL512604.1-201ENST00000404812 257 ntBASIC0.36□□□□□ -2.35
VCANP13611 PTP4A1P1-201ENST00000420539 515 ntBASIC0.36□□□□□ -2.35
VCANP13611 AC013268.2-201ENST00000420753 337 ntBASIC0.36□□□□□ -2.35
VCANP13611 SFR1P2-201ENST00000421841 730 ntBASIC0.36□□□□□ -2.35
VCANP13611 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.36□□□□□ -2.35
VCANP13611 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.36□□□□□ -2.35
VCANP13611 AL163153.1-201ENST00000554223 283 ntBASIC0.36□□□□□ -2.35
VCANP13611 AL669831.4-202ENST00000590817 238 ntBASIC0.36□□□□□ -2.35
VCANP13611 MTCO2P22-201ENST00000603246 681 ntBASIC0.36□□□□□ -2.35
VCANP13611 AC130454.1-201ENST00000622948 401 ntBASIC0.36□□□□□ -2.35
VCANP13611 AC006065.5-201ENST00000623427 349 ntBASIC0.36□□□□□ -2.35
VCANP13611 AL391516.1-201ENST00000554380 2449 ntBASIC0.35□□□□□ -2.35
VCANP13611 RNU6-45P-201ENST00000384471 107 ntBASIC0.35□□□□□ -2.35
VCANP13611 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.35□□□□□ -2.35
VCANP13611 OSBPL9P3-201ENST00000534523 595 ntBASIC0.35□□□□□ -2.35
VCANP13611 AC008555.8-201ENST00000623602 2168 ntBASIC0.35□□□□□ -2.35
VCANP13611 Z80107.1-201ENST00000436830 412 ntBASIC0.35□□□□□ -2.35
VCANP13611 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.35□□□□□ -2.35
VCANP13611 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.35□□□□□ -2.35
VCANP13611 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.35□□□□□ -2.35
VCANP13611 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC0.35□□□□□ -2.35
VCANP13611 RPL30P13-201ENST00000418873 348 ntBASIC0.34□□□□□ -2.35
VCANP13611 CYCTP-201ENST00000504253 315 ntBASIC0.34□□□□□ -2.35
VCANP13611 Y_RNA.659-201ENST00000515994 113 ntBASIC0.34□□□□□ -2.35
VCANP13611 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
VCANP13611 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.34□□□□□ -2.35
VCANP13611 CCT4P2-201ENST00000233836 1548 ntBASIC0.34□□□□□ -2.35
VCANP13611 OR5AQ1P-203ENST00000641818 1529 ntBASIC0.34□□□□□ -2.35
VCANP13611 RNY3P5-201ENST00000384127 102 ntBASIC0.34□□□□□ -2.36
VCANP13611 SNORD23.1-201ENST00000408212 104 ntBASIC0.34□□□□□ -2.36
VCANP13611 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.34□□□□□ -2.36
VCANP13611 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.34□□□□□ -2.36
VCANP13611 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.34□□□□□ -2.36
VCANP13611 AL161734.1-201ENST00000609720 557 ntBASIC0.34□□□□□ -2.36
VCANP13611 RNU6-1187P-201ENST00000364771 110 ntBASIC0.34□□□□□ -2.36
VCANP13611 AL133384.1-201ENST00000412744 351 ntBASIC0.34□□□□□ -2.36
VCANP13611 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.34□□□□□ -2.36
VCANP13611 AL157398.1-201ENST00000452981 186 ntBASIC0.34□□□□□ -2.36
VCANP13611 MTCYBP23-201ENST00000558717 1102 ntBASIC0.34□□□□□ -2.36
VCANP13611 AC003001.2-201ENST00000616294 831 ntBASIC0.34□□□□□ -2.36
VCANP13611 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.33□□□□□ -2.36
VCANP13611 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.33□□□□□ -2.36
VCANP13611 SNORD57-201ENST00000448188 72 ntBASIC0.33□□□□□ -2.36
VCANP13611 MIR4645-201ENST00000583158 77 ntBASIC0.33□□□□□ -2.36
VCANP13611 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.33□□□□□ -2.36
VCANP13611 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
VCANP13611 CDC42P4-201ENST00000510507 563 ntBASIC0.33□□□□□ -2.36
VCANP13611 AC022662.1-201ENST00000580252 331 ntBASIC0.33□□□□□ -2.36
VCANP13611 AC099654.7-201ENST00000635788 2127 ntBASIC0.33□□□□□ -2.36
VCANP13611 Y_RNA.476-201ENST00000384347 108 ntBASIC0.32□□□□□ -2.36
VCANP13611 MTND4P6-201ENST00000438297 472 ntBASIC0.32□□□□□ -2.36
VCANP13611 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
VCANP13611 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
VCANP13611 OR5BM1P-201ENST00000512021 366 ntBASIC0.32□□□□□ -2.36
VCANP13611 RNA5SP471-201ENST00000516971 106 ntBASIC0.32□□□□□ -2.36
VCANP13611 AC004987.4-201ENST00000603383 338 ntBASIC0.32□□□□□ -2.36
VCANP13611 AC104763.3-201ENST00000613765 618 ntBASIC0.32□□□□□ -2.36
VCANP13611 MIR214-201ENST00000385214 110 ntBASIC0.32□□□□□ -2.36
VCANP13611 AC245047.4-201ENST00000433189 144 ntBASIC0.32□□□□□ -2.36
VCANP13611 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.32□□□□□ -2.36
VCANP13611 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.32□□□□□ -2.36
VCANP13611 AL138726.1-201ENST00000614873 333 ntBASIC0.32□□□□□ -2.36
VCANP13611 SNORD114-31-201ENST00000363219 75 ntBASIC0.32□□□□□ -2.36
VCANP13611 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
VCANP13611 AC114737.2-201ENST00000421583 173 ntBASIC0.32□□□□□ -2.36
VCANP13611 HSBP1P2-201ENST00000299671 229 ntBASIC0.31□□□□□ -2.36
VCANP13611 SNORD26-201ENST00000384147 75 ntBASIC0.31□□□□□ -2.36
VCANP13611 RPS4XP3-201ENST00000398541 413 ntBASIC0.31□□□□□ -2.36
VCANP13611 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.31□□□□□ -2.36
VCANP13611 AC097463.2-201ENST00000421074 142 ntBASIC0.31□□□□□ -2.36
VCANP13611 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
VCANP13611 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.31□□□□□ -2.36
VCANP13611 MIR6130-201ENST00000619419 109 ntBASIC0.31□□□□□ -2.36
VCANP13611 AC093155.1-201ENST00000440164 826 ntBASIC0.31□□□□□ -2.36
VCANP13611 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.31□□□□□ -2.36
VCANP13611 RNU6-1004P-201ENST00000516584 111 ntBASIC0.31□□□□□ -2.36
VCANP13611 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.31□□□□□ -2.36
VCANP13611 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.31□□□□□ -2.36
VCANP13611 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
VCANP13611 NDUFB4P7-201ENST00000423198 363 ntBASIC0.31□□□□□ -2.36
VCANP13611 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.31□□□□□ -2.36
VCANP13611 RPS26P56-201ENST00000444468 240 ntBASIC0.31□□□□□ -2.36
VCANP13611 AC016717.1-201ENST00000448918 286 ntBASIC0.31□□□□□ -2.36
VCANP13611 AC106800.4-201ENST00000614905 153 ntBASIC0.31□□□□□ -2.36
VCANP13611 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
VCANP13611 RPS6P14-201ENST00000425165 719 ntBASIC0.3□□□□□ -2.36
VCANP13611 RSU1P2-202ENST00000437884 485 ntBASIC0.3□□□□□ -2.36
VCANP13611 AL590705.4-201ENST00000532209 134 ntBASIC0.3□□□□□ -2.36
VCANP13611 RNU6-889P-201ENST00000517189 103 ntBASIC0.3□□□□□ -2.36
VCANP13611 AC090115.3-201ENST00000553218 849 ntBASIC0.3□□□□□ -2.36
VCANP13611 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
VCANP13611 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
VCANP13611 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
VCANP13611 RPS27P22-201ENST00000478056 241 ntBASIC0.29□□□□□ -2.36
VCANP13611 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.29□□□□□ -2.36
VCANP13611 OR5AL2P-201ENST00000532185 920 ntBASIC0.29□□□□□ -2.36
VCANP13611 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms