Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.39□□□□□ -2.19
CFTRP13569 AC023141.11-201ENST00000508864 202 ntBASIC1.39□□□□□ -2.19
CFTRP13569 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CFTRP13569 SNORA31.25-201ENST00000517242 134 ntBASIC1.39□□□□□ -2.19
CFTRP13569 AC087465.1-201ENST00000560574 245 ntBASIC1.39□□□□□ -2.19
CFTRP13569 SULT1C2P1-202ENST00000562418 459 ntBASIC1.39□□□□□ -2.19
CFTRP13569 AC078899.2-201ENST00000595282 212 ntBASIC1.39□□□□□ -2.19
CFTRP13569 AL109918.3-201ENST00000603072 338 ntBASIC1.39□□□□□ -2.19
CFTRP13569 AL355297.2-201ENST00000604792 129 ntBASIC1.39□□□□□ -2.19
CFTRP13569 AC110792.4-201ENST00000609843 298 ntBASIC1.39□□□□□ -2.19
CFTRP13569 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CFTRP13569 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.39□□□□□ -2.19
CFTRP13569 RNA5SP257-201ENST00000363023 116 ntBASIC1.38□□□□□ -2.19
CFTRP13569 RNA5SP62-201ENST00000363457 110 ntBASIC1.38□□□□□ -2.19
CFTRP13569 RNU6-270P-201ENST00000364131 105 ntBASIC1.38□□□□□ -2.19
CFTRP13569 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CFTRP13569 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.38□□□□□ -2.19
CFTRP13569 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.38□□□□□ -2.19
CFTRP13569 MTCO3P46-201ENST00000425787 232 ntBASIC1.38□□□□□ -2.19
CFTRP13569 AL356867.1-201ENST00000429623 299 ntBASIC1.38□□□□□ -2.19
CFTRP13569 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.38□□□□□ -2.19
CFTRP13569 AC093155.1-201ENST00000440164 826 ntBASIC1.38□□□□□ -2.19
CFTRP13569 AL691517.1-201ENST00000440833 1235 ntBASIC1.38□□□□□ -2.19
CFTRP13569 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
CFTRP13569 RNU6-420P-201ENST00000458780 107 ntBASIC1.38□□□□□ -2.19
CFTRP13569 RPL31P60-201ENST00000478450 367 ntBASIC1.38□□□□□ -2.19
CFTRP13569 AC026801.1-201ENST00000497178 464 ntBASIC1.38□□□□□ -2.19
CFTRP13569 AC112518.2-201ENST00000508565 425 ntBASIC1.38□□□□□ -2.19
CFTRP13569 RNU6-928P-201ENST00000516876 104 ntBASIC1.38□□□□□ -2.19
CFTRP13569 EIF4EP5-201ENST00000528228 640 ntBASIC1.38□□□□□ -2.19
CFTRP13569 CYCSP2-201ENST00000558168 301 ntBASIC1.38□□□□□ -2.19
CFTRP13569 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CFTRP13569 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.38□□□□□ -2.19
CFTRP13569 AL589743.1-201ENST00000551932 2712 ntBASIC1.38□□□□□ -2.19
CFTRP13569 RNU4-23P-201ENST00000362839 140 ntBASIC1.37□□□□□ -2.19
CFTRP13569 AL512604.1-201ENST00000404812 257 ntBASIC1.37□□□□□ -2.19
CFTRP13569 AL500527.1-201ENST00000448532 255 ntBASIC1.37□□□□□ -2.19
CFTRP13569 Z82190.1-201ENST00000454534 490 ntBASIC1.37□□□□□ -2.19
CFTRP13569 AC012669.1-201ENST00000603209 283 ntBASIC1.37□□□□□ -2.19
CFTRP13569 AC079791.1-201ENST00000605356 973 ntBASIC1.37□□□□□ -2.19
CFTRP13569 AC010487.4-201ENST00000637027 61 ntBASIC1.37□□□□□ -2.19
CFTRP13569 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.37□□□□□ -2.19
CFTRP13569 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
CFTRP13569 Y_RNA.433-201ENST00000384089 102 ntBASIC1.37□□□□□ -2.19
CFTRP13569 U8.14-201ENST00000390843 143 ntBASIC1.37□□□□□ -2.19
CFTRP13569 RNU2-41P-201ENST00000410991 178 ntBASIC1.37□□□□□ -2.19
CFTRP13569 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.37□□□□□ -2.19
CFTRP13569 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.37□□□□□ -2.19
CFTRP13569 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.37□□□□□ -2.19
CFTRP13569 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.37□□□□□ -2.19
CFTRP13569 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.37□□□□□ -2.19
CFTRP13569 AC025588.2-201ENST00000604851 466 ntBASIC1.37□□□□□ -2.19
CFTRP13569 AC090517.3-201ENST00000625170 141 ntBASIC1.37□□□□□ -2.19
CFTRP13569 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CFTRP13569 AC008163.1-202ENST00000636004 2889 ntBASIC1.36□□□□□ -2.19
CFTRP13569 SNORD114-23-201ENST00000363536 72 ntBASIC1.36□□□□□ -2.19
CFTRP13569 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.36□□□□□ -2.19
CFTRP13569 AC244636.1-201ENST00000421152 228 ntBASIC1.36□□□□□ -2.19
CFTRP13569 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.36□□□□□ -2.19
CFTRP13569 Z80107.1-201ENST00000436830 412 ntBASIC1.36□□□□□ -2.19
CFTRP13569 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.36□□□□□ -2.19
CFTRP13569 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.36□□□□□ -2.19
CFTRP13569 AC073968.1-201ENST00000618594 637 ntBASIC1.36□□□□□ -2.19
CFTRP13569 AC009541.1-201ENST00000438279 2662 ntBASIC1.36□□□□□ -2.19
CFTRP13569 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CFTRP13569 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
CFTRP13569 MIR330-201ENST00000362196 94 ntBASIC1.35□□□□□ -2.19
CFTRP13569 SNORA70.7-201ENST00000384159 133 ntBASIC1.35□□□□□ -2.19
CFTRP13569 AL356432.1-201ENST00000405809 419 ntBASIC1.35□□□□□ -2.19
CFTRP13569 AL161449.1-201ENST00000414531 1199 ntBASIC1.35□□□□□ -2.19
CFTRP13569 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.35□□□□□ -2.19
CFTRP13569 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.35□□□□□ -2.19
CFTRP13569 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.35□□□□□ -2.19
CFTRP13569 GTF2IP20-201ENST00000431663 360 ntBASIC1.35□□□□□ -2.19
CFTRP13569 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.35□□□□□ -2.19
CFTRP13569 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.35□□□□□ -2.19
CFTRP13569 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.35□□□□□ -2.19
CFTRP13569 AC147055.4-201ENST00000504399 745 ntBASIC1.35□□□□□ -2.19
CFTRP13569 SCARNA11.3-201ENST00000517276 130 ntBASIC1.35□□□□□ -2.19
CFTRP13569 C1DP5-201ENST00000525775 383 ntBASIC1.35□□□□□ -2.19
CFTRP13569 AC118273.2-201ENST00000532092 465 ntBASIC1.35□□□□□ -2.19
CFTRP13569 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.35□□□□□ -2.19
CFTRP13569 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.35□□□□□ -2.19
CFTRP13569 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.35□□□□□ -2.19
CFTRP13569 AC005034.5-201ENST00000604219 466 ntBASIC1.35□□□□□ -2.19
CFTRP13569 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.35□□□□□ -2.19
CFTRP13569 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.35□□□□□ -2.19
CFTRP13569 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.35□□□□□ -2.19
CFTRP13569 ZNF702P-202ENST00000434269 1966 ntBASIC1.34□□□□□ -2.19
CFTRP13569 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.34□□□□□ -2.19
CFTRP13569 RNU6-1328P-201ENST00000410938 106 ntBASIC1.34□□□□□ -2.19
CFTRP13569 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.34□□□□□ -2.19
CFTRP13569 AC117525.1-201ENST00000515228 503 ntBASIC1.34□□□□□ -2.19
CFTRP13569 MTCYBP27-201ENST00000555160 670 ntBASIC1.34□□□□□ -2.19
CFTRP13569 AC133485.1-201ENST00000567176 124 ntBASIC1.34□□□□□ -2.19
CFTRP13569 AC138907.6-201ENST00000568401 126 ntBASIC1.34□□□□□ -2.19
CFTRP13569 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.34□□□□□ -2.19
CFTRP13569 AC117490.2-201ENST00000610042 594 ntBASIC1.34□□□□□ -2.19
CFTRP13569 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
CFTRP13569 RN7SKP158-201ENST00000410453 326 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms