Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RB1P06400 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.19□□□□□ -1.9
RB1P06400 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
RB1P06400 AL035413.2-201ENST00000604801 525 ntBASIC3.19□□□□□ -1.9
RB1P06400 MIR98-201ENST00000606724 119 ntBASIC3.19□□□□□ -1.9
RB1P06400 MIR6715A-201ENST00000615929 79 ntBASIC3.19□□□□□ -1.9
RB1P06400 AC072046.2-201ENST00000618366 268 ntBASIC3.19□□□□□ -1.9
RB1P06400 API5P2-201ENST00000397055 1498 ntBASIC3.19□□□□□ -1.9
RB1P06400 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.19□□□□□ -1.9
RB1P06400 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RB1P06400 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
RB1P06400 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RB1P06400 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.19□□□□□ -1.9
RB1P06400 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RB1P06400 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RB1P06400 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RB1P06400 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RB1P06400 RNU6-190P-201ENST00000384154 102 ntBASIC3.18□□□□□ -1.9
RB1P06400 RNU6-1119P-201ENST00000384349 108 ntBASIC3.18□□□□□ -1.9
RB1P06400 ATG3P1-201ENST00000419507 911 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.18□□□□□ -1.9
RB1P06400 ISCA1P1-201ENST00000426679 387 ntBASIC3.18□□□□□ -1.9
RB1P06400 GPM6BP2-201ENST00000432046 144 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC087499.2-201ENST00000432861 149 ntBASIC3.18□□□□□ -1.9
RB1P06400 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.18□□□□□ -1.9
RB1P06400 RPL36AP6-201ENST00000435770 321 ntBASIC3.18□□□□□ -1.9
RB1P06400 SNRPEP9-201ENST00000436794 238 ntBASIC3.18□□□□□ -1.9
RB1P06400 GPM6BP1-201ENST00000446387 144 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC079448.1-201ENST00000449377 373 ntBASIC3.18□□□□□ -1.9
RB1P06400 FABP5P15-201ENST00000453566 214 ntBASIC3.18□□□□□ -1.9
RB1P06400 RPL12P25-201ENST00000455592 494 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.18□□□□□ -1.9
RB1P06400 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.18□□□□□ -1.9
RB1P06400 RN7SKP298-201ENST00000515950 94 ntBASIC3.18□□□□□ -1.9
RB1P06400 MTCO2P4-201ENST00000517968 247 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC090572.1-201ENST00000519251 160 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.18□□□□□ -1.9
RB1P06400 AP003072.2-201ENST00000527756 676 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC024909.2-201ENST00000553035 286 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.18□□□□□ -1.9
RB1P06400 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.18□□□□□ -1.9
RB1P06400 AC068790.2-201ENST00000602601 557 ntBASIC3.18□□□□□ -1.9
RB1P06400 AL589743.7-201ENST00000612637 233 ntBASIC3.18□□□□□ -1.9
RB1P06400 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RB1P06400 AC008498.1-201ENST00000613012 531 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC099842.1-201ENST00000619919 596 ntBASIC3.18□□□□□ -1.9
RB1P06400 AC092656.1-203ENST00000624134 423 ntBASIC3.18□□□□□ -1.9
RB1P06400 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.18□□□□□ -1.9
RB1P06400 MTND5P42-201ENST00000637720 498 ntBASIC3.18□□□□□ -1.9
RB1P06400 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RB1P06400 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RB1P06400 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.18□□□□□ -1.9
RB1P06400 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RB1P06400 AL355596.1-201ENST00000565399 3996 ntBASIC3.17□□□□□ -1.9
RB1P06400 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RB1P06400 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RB1P06400 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RB1P06400 RNU6-799P-201ENST00000363567 107 ntBASIC3.17□□□□□ -1.9
RB1P06400 RNU6-288P-201ENST00000363690 104 ntBASIC3.17□□□□□ -1.9
RB1P06400 RNU6-641P-201ENST00000384006 107 ntBASIC3.17□□□□□ -1.9
RB1P06400 RPS12P24-201ENST00000412619 387 ntBASIC3.17□□□□□ -1.9
RB1P06400 AC245291.1-201ENST00000419501 328 ntBASIC3.17□□□□□ -1.9
RB1P06400 PIGFP2-201ENST00000421400 651 ntBASIC3.17□□□□□ -1.9
RB1P06400 AC133104.1-201ENST00000429100 218 ntBASIC3.17□□□□□ -1.9
RB1P06400 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.17□□□□□ -1.9
RB1P06400 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.17□□□□□ -1.9
RB1P06400 OR2B8P-201ENST00000432841 938 ntBASIC3.17□□□□□ -1.9
RB1P06400 MTCO3P5-201ENST00000433620 714 ntBASIC3.17□□□□□ -1.9
RB1P06400 RPL23AP22-201ENST00000437556 453 ntBASIC3.17□□□□□ -1.9
RB1P06400 MTND4P25-201ENST00000441039 533 ntBASIC3.17□□□□□ -1.9
RB1P06400 CECR9-201ENST00000453421 199 ntBASIC3.17□□□□□ -1.9
RB1P06400 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.17□□□□□ -1.9
RB1P06400 TPT1P7-201ENST00000458300 517 ntBASIC3.17□□□□□ -1.9
RB1P06400 AC104027.1-201ENST00000521887 300 ntBASIC3.17□□□□□ -1.9
RB1P06400 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.17□□□□□ -1.9
RB1P06400 AC174048.1-201ENST00000603389 144 ntBASIC3.17□□□□□ -1.9
RB1P06400 AC004805.2-201ENST00000605382 482 ntBASIC3.17□□□□□ -1.9
RB1P06400 AC005332.10-201ENST00000612725 619 ntBASIC3.17□□□□□ -1.9
RB1P06400 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RB1P06400 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RB1P06400 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RB1P06400 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
RB1P06400 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RB1P06400 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.16□□□□□ -1.9
RB1P06400 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.16□□□□□ -1.9
RB1P06400 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RB1P06400 RNU4-24P-201ENST00000364565 139 ntBASIC3.16□□□□□ -1.9
RB1P06400 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RB1P06400 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RB1P06400 RNU2-39P-201ENST00000410604 198 ntBASIC3.16□□□□□ -1.9
RB1P06400 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.16□□□□□ -1.9
RB1P06400 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.16□□□□□ -1.9
RB1P06400 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.16□□□□□ -1.9
RB1P06400 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.16□□□□□ -1.9
RB1P06400 AL591212.2-201ENST00000433923 257 ntBASIC3.16□□□□□ -1.9
RB1P06400 AL714022.1-201ENST00000439897 151 ntBASIC3.16□□□□□ -1.9
RB1P06400 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.16□□□□□ -1.9
RB1P06400 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.16□□□□□ -1.9
RB1P06400 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.16□□□□□ -1.9
RB1P06400 RPL39P36-201ENST00000490784 156 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms