Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AC008526.1-201ENST00000509149 338 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 RNU6-334P-201ENST00000517072 102 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 RNU2-19P-201ENST00000517288 84 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 SLC2A13P1-201ENST00000531560 322 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 CBX3P7-201ENST00000532876 502 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AC022662.1-201ENST00000580252 331 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 VN1R87P-201ENST00000596706 487 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AC025165.5-201ENST00000602802 578 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AL445435.1-201ENST00000604232 665 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AL139344.1-201ENST00000605228 195 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AL627230.6-201ENST00000611129 280 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AC104763.3-201ENST00000613765 618 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AC024581.2-201ENST00000619986 252 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AP002791.1-201ENST00000623291 381 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 AC109454.4-201ENST00000623411 649 ntBASIC1.59□□□□□ -2.15
HLA-DQB2P05538 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.59□□□□□ -2.15
HLA-DQB2P05538 MTND5P30-201ENST00000452896 1731 ntBASIC1.59□□□□□ -2.16
HLA-DQB2P05538 AL354685.2-201ENST00000448218 1447 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 RNU2-42P-201ENST00000410697 113 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 RNA5SP270-201ENST00000411361 118 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AC007435.1-201ENST00000421086 415 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 RPL17P35-201ENST00000432217 549 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 GTF2IP7-202ENST00000436677 309 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 ARPC3P5-201ENST00000448802 534 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AMD1P1-201ENST00000457220 922 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 RNU7-136P-201ENST00000458819 69 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 HMGB1P36-201ENST00000487709 576 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 HMGB1P28-201ENST00000507778 552 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 MTCYBP16-201ENST00000509187 1129 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AC090897.2-201ENST00000581715 130 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AC009977.1-201ENST00000586015 570 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AC108479.2-201ENST00000617314 601 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 U4atac.1-201ENST00000618345 95 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 AC007490.1-201ENST00000624321 703 ntBASIC1.58□□□□□ -2.16
HLA-DQB2P05538 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
HLA-DQB2P05538 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 RNU6-952P-201ENST00000391164 108 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 RNU6-754P-201ENST00000391166 107 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 POLHP1-201ENST00000411806 470 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 BTF3P8-201ENST00000414577 526 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 TOMM20P4-201ENST00000427861 435 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AC004383.1-201ENST00000438135 289 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 MTND1P9-201ENST00000453775 944 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 BX322784.1-201ENST00000455793 1077 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 RPL23AP41-201ENST00000484754 458 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AF213884.2-201ENST00000510417 903 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 MRPS17P9-201ENST00000511924 393 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 SNORD19.2-201ENST00000516978 73 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AL353997.4-201ENST00000586196 166 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AC005261.5-201ENST00000596280 355 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AC004805.2-201ENST00000605382 482 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AL121652.1-201ENST00000608851 448 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 AC107075.1-201ENST00000613695 314 ntBASIC1.57□□□□□ -2.16
HLA-DQB2P05538 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HLA-DQB2P05538 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 RNU6-236P-201ENST00000363886 106 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 RPL31P63-201ENST00000422565 375 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 ELOCP14-201ENST00000428070 331 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 COX7BP2-201ENST00000437976 242 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 ELOCP7-201ENST00000439968 331 ntBASIC1.56□□□□□ -2.16
HLA-DQB2P05538 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.56□□□□□ -2.16
HLA-DQB2P05538 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms