Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LDLRP01130 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRP01130 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.19□□□□□ -1.9
LDLRP01130 AL845331.3-202ENST00000562856 261 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AL391840.1-201ENST00000571144 367 ntBASIC3.19□□□□□ -1.9
LDLRP01130 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.19□□□□□ -1.9
LDLRP01130 MIR4293-201ENST00000584305 78 ntBASIC3.19□□□□□ -1.9
LDLRP01130 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
LDLRP01130 AC068831.7-201ENST00000616954 363 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AC010338.1-201ENST00000621823 717 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AP003122.6-201ENST00000623831 495 ntBASIC3.19□□□□□ -1.9
LDLRP01130 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LDLRP01130 MIR1321-201ENST00000637766 79 ntBASIC3.19□□□□□ -1.9
LDLRP01130 ZNF680P1-201ENST00000436625 1469 ntBASIC3.19□□□□□ -1.9
LDLRP01130 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LDLRP01130 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.18□□□□□ -1.9
LDLRP01130 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LDLRP01130 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.18□□□□□ -1.9
LDLRP01130 OR4G2P-202ENST00000641004 1759 ntBASIC3.18□□□□□ -1.9
LDLRP01130 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LDLRP01130 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LDLRP01130 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.18□□□□□ -1.9
LDLRP01130 Y_RNA.160-201ENST00000363677 92 ntBASIC3.18□□□□□ -1.9
LDLRP01130 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LDLRP01130 SNORA20.2-201ENST00000383922 131 ntBASIC3.18□□□□□ -1.9
LDLRP01130 SNORD17-201ENST00000390930 237 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.18□□□□□ -1.9
LDLRP01130 RPL21P111-201ENST00000418453 477 ntBASIC3.18□□□□□ -1.9
LDLRP01130 YPEL5P1-201ENST00000419731 367 ntBASIC3.18□□□□□ -1.9
LDLRP01130 RPL7P46-201ENST00000425129 740 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRP01130 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRP01130 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRP01130 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRP01130 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRP01130 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.18□□□□□ -1.9
LDLRP01130 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.18□□□□□ -1.9
LDLRP01130 RPL31P60-201ENST00000478450 367 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AC006483.1-201ENST00000487308 313 ntBASIC3.18□□□□□ -1.9
LDLRP01130 RN7SL504P-201ENST00000494496 287 ntBASIC3.18□□□□□ -1.9
LDLRP01130 MTND3P22-201ENST00000510932 243 ntBASIC3.18□□□□□ -1.9
LDLRP01130 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
LDLRP01130 SNORA70.16-201ENST00000516390 95 ntBASIC3.18□□□□□ -1.9
LDLRP01130 RNU6-1153P-201ENST00000516760 105 ntBASIC3.18□□□□□ -1.9
LDLRP01130 SNORD59.2-201ENST00000516873 68 ntBASIC3.18□□□□□ -1.9
LDLRP01130 RNU6-1220P-201ENST00000517126 108 ntBASIC3.18□□□□□ -1.9
LDLRP01130 MTND1P35-201ENST00000526739 508 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.18□□□□□ -1.9
LDLRP01130 ARL2BPP2-201ENST00000550907 489 ntBASIC3.18□□□□□ -1.9
LDLRP01130 TRAV37-201ENST00000553906 342 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRP01130 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRP01130 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.18□□□□□ -1.9
LDLRP01130 NRBF2P1-201ENST00000587407 859 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AP001029.3-201ENST00000588063 596 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AL451007.1-201ENST00000595491 289 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AL391646.1-201ENST00000603860 190 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AC005034.5-201ENST00000604219 466 ntBASIC3.18□□□□□ -1.9
LDLRP01130 MIR98-201ENST00000606724 119 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AC103710.2-201ENST00000609912 942 ntBASIC3.18□□□□□ -1.9
LDLRP01130 AL110115.1-201ENST00000614396 364 ntBASIC3.18□□□□□ -1.9
LDLRP01130 SDR42E1P2-201ENST00000614861 481 ntBASIC3.18□□□□□ -1.9
LDLRP01130 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.18□□□□□ -1.9
LDLRP01130 FER-210ENST00000628534 558 ntTSL 5 BASIC3.18□□□□□ -1.9
LDLRP01130 AC006026.1-201ENST00000444025 1803 ntBASIC3.18□□□□□ -1.9
LDLRP01130 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LDLRP01130 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LDLRP01130 AL365361.1-201ENST00000566942 3481 ntBASIC3.17□□□□□ -1.9
LDLRP01130 RNY1P12-201ENST00000364251 105 ntBASIC3.17□□□□□ -1.9
LDLRP01130 Y_RNA.263-201ENST00000364659 114 ntBASIC3.17□□□□□ -1.9
LDLRP01130 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
LDLRP01130 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LDLRP01130 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.17□□□□□ -1.9
LDLRP01130 RPL32P35-201ENST00000415214 394 ntBASIC3.17□□□□□ -1.9
LDLRP01130 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.17□□□□□ -1.9
LDLRP01130 USP9YP27-201ENST00000418455 438 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.17□□□□□ -1.9
LDLRP01130 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.17□□□□□ -1.9
LDLRP01130 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LDLRP01130 AC140076.1-201ENST00000449897 361 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.17□□□□□ -1.9
LDLRP01130 RPS23P3-201ENST00000470993 430 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AC093663.1-201ENST00000497190 394 ntBASIC3.17□□□□□ -1.9
LDLRP01130 MTCO2P30-201ENST00000503662 364 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LDLRP01130 AC114786.4-201ENST00000508771 728 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AL359273.1-201ENST00000510918 627 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AC025465.4-201ENST00000513422 638 ntBASIC3.17□□□□□ -1.9
LDLRP01130 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
LDLRP01130 Y_RNA.693-201ENST00000516641 110 ntBASIC3.17□□□□□ -1.9
LDLRP01130 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.17□□□□□ -1.9
LDLRP01130 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.17□□□□□ -1.9
LDLRP01130 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.17□□□□□ -1.9
LDLRP01130 AC128657.1-201ENST00000549459 145 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.17□□□□□ -1.9
LDLRP01130 AC055876.1-202ENST00000567053 138 ntBASIC3.17□□□□□ -1.9
LDLRP01130 MIR5680-201ENST00000577577 84 ntBASIC3.17□□□□□ -1.9
LDLRP01130 MIR3167-201ENST00000579623 85 ntBASIC3.17□□□□□ -1.9
LDLRP01130 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms