Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RNU6-433P-201ENST00000363216 104 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 Y_RNA.111-201ENST00000363248 100 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 RNU6-157P-201ENST00000383957 107 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 RNU6-723P-201ENST00000383973 107 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 RNU6-83P-201ENST00000384568 112 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CPSF4O95639 SSR1P2-201ENST00000415208 787 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.67□□□□□ -2.14
CPSF4O95639 AL645568.3-201ENST00000433683 316 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.67□□□□□ -2.14
CPSF4O95639 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.67□□□□□ -2.14
CPSF4O95639 MTATP6P30-201ENST00000443540 664 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.67□□□□□ -2.14
CPSF4O95639 RPS15AP27-201ENST00000449183 343 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.67□□□□□ -2.14
CPSF4O95639 AC008481.1-201ENST00000463278 396 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 MRPS17P3-201ENST00000465453 385 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CPSF4O95639 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.67□□□□□ -2.14
CPSF4O95639 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.67□□□□□ -2.14
CPSF4O95639 RNU6-390P-201ENST00000516259 103 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
CPSF4O95639 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.67□□□□□ -2.14
CPSF4O95639 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.67□□□□□ -2.14
CPSF4O95639 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.67□□□□□ -2.14
CPSF4O95639 AC091544.4-201ENST00000555268 342 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AL133153.1-201ENST00000557756 303 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AC110588.1-201ENST00000559699 137 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AC087465.1-201ENST00000560574 245 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AC136618.2-201ENST00000575091 400 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.67□□□□□ -2.14
CPSF4O95639 AL391001.1-201ENST00000602747 715 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 MTND4LP5-201ENST00000605152 292 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AC007349.4-201ENST00000608114 532 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 FTX_3.1-201ENST00000610451 147 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AL139418.1-201ENST00000613613 177 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.67□□□□□ -2.14
CPSF4O95639 HMGB1P24-202ENST00000615653 685 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AC012150.2-201ENST00000621300 544 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AP000676.3-201ENST00000623299 569 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 AL078595.3-201ENST00000623815 1166 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 CR848007.1-201ENST00000442354 1699 ntBASIC1.67□□□□□ -2.14
CPSF4O95639 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.66□□□□□ -2.14
CPSF4O95639 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CPSF4O95639 RNU6-884P-201ENST00000363889 107 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 MIR19A-201ENST00000384878 82 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 SNORA40.18-201ENST00000391200 128 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 AC119751.3-201ENST00000399720 670 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 AL513475.1-201ENST00000406602 315 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 RPL23AP39-201ENST00000415533 405 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.66□□□□□ -2.14
CPSF4O95639 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.66□□□□□ -2.14
CPSF4O95639 AC236972.1-201ENST00000433225 199 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.66□□□□□ -2.14
CPSF4O95639 IPO7P1-201ENST00000442031 636 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 RPL23AP35-201ENST00000451906 501 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 AC010631.1-201ENST00000474150 156 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.66□□□□□ -2.14
CPSF4O95639 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.66□□□□□ -2.14
CPSF4O95639 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.66□□□□□ -2.14
CPSF4O95639 AC114786.4-201ENST00000508771 728 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4O95639 AC114797.1-201ENST00000514003 728 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 ATP5F1P5-201ENST00000526403 760 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 MTCO2P15-201ENST00000532655 656 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4O95639 DUXAP1-201ENST00000556632 463 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 MTND4P33-201ENST00000556706 766 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4O95639 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.66□□□□□ -2.14
CPSF4O95639 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CPSF4O95639 AC072039.2-201ENST00000608883 439 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 AC103710.2-201ENST00000609912 942 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 AC092106.3-201ENST00000611308 722 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 OR4G3P-201ENST00000633500 913 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 ZNF355P-201ENST00000427301 3216 ntBASIC1.66□□□□□ -2.14
CPSF4O95639 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.66□□□□□ -2.14
CPSF4O95639 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CPSF4O95639 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.66□□□□□ -2.14
CPSF4O95639 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.66□□□□□ -2.14
CPSF4O95639 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.65□□□□□ -2.14
CPSF4O95639 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
CPSF4O95639 AC092125.1-201ENST00000562568 1995 ntBASIC1.65□□□□□ -2.14
CPSF4O95639 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.65□□□□□ -2.14
CPSF4O95639 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.65□□□□□ -2.15
CPSF4O95639 SNORD48-201ENST00000364953 64 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
CPSF4O95639 Y_RNA.500-201ENST00000384466 111 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 MIR9-3-201ENST00000385084 90 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 MIR513B-201ENST00000385136 84 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 CCNG1P1-201ENST00000406783 885 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 MIR1305-201ENST00000408300 86 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 RN7SKP192-201ENST00000411291 327 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 AC023141.4-201ENST00000412031 328 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 RPL21P24-201ENST00000413752 448 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 BTF3L4P3-201ENST00000418879 476 ntBASIC1.65□□□□□ -2.15
CPSF4O95639 USP9YP26-201ENST00000421008 661 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms