Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC008489.1-201ENST00000524271 483 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.01□□□□□ -1.77
CNOT4O95628 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.01□□□□□ -1.77
CNOT4O95628 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.01□□□□□ -1.77
CNOT4O95628 AC007224.1-201ENST00000564410 144 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.01□□□□□ -1.77
CNOT4O95628 AC015912.2-201ENST00000571053 181 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 AC012119.1-201ENST00000603184 222 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 SNORD58B-201ENST00000607313 66 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.01□□□□□ -1.77
CNOT4O95628 CPHL1P-201ENST00000461341 3407 ntBASIC4.01□□□□□ -1.77
CNOT4O95628 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.01□□□□□ -1.77
CNOT4O95628 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CNOT4O95628 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CNOT4O95628 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CNOT4O95628 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4□□□□□ -1.77
CNOT4O95628 RNU6-266P-201ENST00000364225 107 ntBASIC4□□□□□ -1.77
CNOT4O95628 Y_RNA.424-201ENST00000384063 103 ntBASIC4□□□□□ -1.77
CNOT4O95628 RNU6-842P-201ENST00000384269 107 ntBASIC4□□□□□ -1.77
CNOT4O95628 Y_RNA.512-201ENST00000384518 102 ntBASIC4□□□□□ -1.77
CNOT4O95628 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4□□□□□ -1.77
CNOT4O95628 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4□□□□□ -1.77
CNOT4O95628 AL591034.1-201ENST00000407447 340 ntBASIC4□□□□□ -1.77
CNOT4O95628 AC009237.10-201ENST00000414112 510 ntBASIC4□□□□□ -1.77
CNOT4O95628 YPEL5P1-201ENST00000419731 367 ntBASIC4□□□□□ -1.77
CNOT4O95628 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4□□□□□ -1.77
CNOT4O95628 AL356387.2-201ENST00000422272 243 ntBASIC4□□□□□ -1.77
CNOT4O95628 MRPS18CP6-201ENST00000423587 223 ntBASIC4□□□□□ -1.77
CNOT4O95628 MTATP6P4-201ENST00000427725 675 ntBASIC4□□□□□ -1.77
CNOT4O95628 AC017083.1-201ENST00000428093 483 ntBASIC4□□□□□ -1.77
CNOT4O95628 AL132765.1-201ENST00000434165 553 ntBASIC4□□□□□ -1.77
CNOT4O95628 AC090774.1-201ENST00000435925 246 ntBASIC4□□□□□ -1.77
CNOT4O95628 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4□□□□□ -1.77
CNOT4O95628 RPS24P13-201ENST00000442520 397 ntBASIC4□□□□□ -1.77
CNOT4O95628 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4□□□□□ -1.77
CNOT4O95628 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4□□□□□ -1.77
CNOT4O95628 PCNPP5-201ENST00000452246 481 ntBASIC4□□□□□ -1.77
CNOT4O95628 RNU7-138P-201ENST00000459479 64 ntBASIC4□□□□□ -1.77
CNOT4O95628 AC068781.1-201ENST00000488231 618 ntBASIC4□□□□□ -1.77
CNOT4O95628 AC092436.3-201ENST00000511788 257 ntBASIC4□□□□□ -1.77
CNOT4O95628 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4□□□□□ -1.77
CNOT4O95628 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4□□□□□ -1.77
CNOT4O95628 GMPSP1-201ENST00000514075 579 ntBASIC4□□□□□ -1.77
CNOT4O95628 RNY3P15-201ENST00000516297 97 ntBASIC4□□□□□ -1.77
CNOT4O95628 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4□□□□□ -1.77
CNOT4O95628 AC022616.4-201ENST00000522985 181 ntBASIC4□□□□□ -1.77
CNOT4O95628 ERHP1-201ENST00000523006 310 ntBASIC4□□□□□ -1.77
CNOT4O95628 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4□□□□□ -1.77
CNOT4O95628 AC091178.1-203ENST00000584586 279 ntBASIC4□□□□□ -1.77
CNOT4O95628 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4□□□□□ -1.77
CNOT4O95628 AC002044.1-201ENST00000606707 158 ntBASIC4□□□□□ -1.77
CNOT4O95628 AL021879.1-201ENST00000611756 288 ntBASIC4□□□□□ -1.77
CNOT4O95628 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4□□□□□ -1.77
CNOT4O95628 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CNOT4O95628 RAD17P1-201ENST00000418130 2042 ntBASIC4□□□□□ -1.77
CNOT4O95628 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CNOT4O95628 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4□□□□□ -1.77
CNOT4O95628 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4□□□□□ -1.77
CNOT4O95628 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNOT4O95628 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNOT4O95628 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNOT4O95628 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CNOT4O95628 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNOT4O95628 RNA5SP515-201ENST00000364570 118 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 RNU6-76P-201ENST00000384060 104 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 Y_RNA.480-201ENST00000384364 102 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 RNU6-1026P-201ENST00000384465 108 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 AL590704.1-201ENST00000402856 794 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 AL603908.1-201ENST00000406098 201 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 MIR1290-201ENST00000408735 78 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.99□□□□□ -1.77
CNOT4O95628 RN7SKP53-201ENST00000411337 315 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.99□□□□□ -1.77
CNOT4O95628 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.99□□□□□ -1.77
CNOT4O95628 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.99□□□□□ -1.77
CNOT4O95628 AC069285.2-201ENST00000440210 275 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 AC011816.1-201ENST00000441346 546 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 SSXP4-201ENST00000451349 245 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 AL353752.1-201ENST00000454946 260 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 RNU7-187P-201ENST00000458985 68 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 RNU6-953P-201ENST00000459154 107 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 RPL37P6-201ENST00000460682 294 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 AC108022.1-201ENST00000493466 478 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 IGKV2-23-201ENST00000518729 323 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 AC131281.1-201ENST00000522984 164 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 HSBP1P1-201ENST00000555205 166 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 SUB1P3-201ENST00000564581 315 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.99□□□□□ -1.77
CNOT4O95628 AL109918.3-201ENST00000603072 338 ntBASIC3.99□□□□□ -1.77
CNOT4O95628 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.99□□□□□ -1.77
CNOT4O95628 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.99□□□□□ -1.77
CNOT4O95628 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.99□□□□□ -1.77
CNOT4O95628 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.99□□□□□ -1.77
CNOT4O95628 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.99□□□□□ -1.77
CNOT4O95628 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CNOT4O95628 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNOT4O95628 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CNOT4O95628 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.99□□□□□ -1.77
CNOT4O95628 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNOT4O95628 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms