Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.98□□□□□ -2.25
POLR1AO95602 AC107954.1-201ENST00000565906 727 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 FAM60BP-201ENST00000578364 658 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 AC021749.1-201ENST00000604322 607 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 AC007038.2-201ENST00000608095 740 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 AC243829.6-201ENST00000612652 106 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 AC079395.3-201ENST00000615161 484 ntBASIC0.98□□□□□ -2.25
POLR1AO95602 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
POLR1AO95602 AC073544.1-201ENST00000600110 1595 ntBASIC0.97□□□□□ -2.25
POLR1AO95602 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
POLR1AO95602 RPL23AP32-201ENST00000395315 459 ntBASIC0.97□□□□□ -2.25
POLR1AO95602 RNA5SP127-201ENST00000411051 133 ntBASIC0.97□□□□□ -2.25
POLR1AO95602 AC092628.1-201ENST00000436250 252 ntBASIC0.97□□□□□ -2.25
POLR1AO95602 AL353689.1-201ENST00000438895 199 ntBASIC0.97□□□□□ -2.25
POLR1AO95602 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.97□□□□□ -2.25
POLR1AO95602 RPS20P10-201ENST00000451209 253 ntBASIC0.97□□□□□ -2.25
POLR1AO95602 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.97□□□□□ -2.25
POLR1AO95602 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.97□□□□□ -2.25
POLR1AO95602 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.97□□□□□ -2.25
POLR1AO95602 OR1M4P-201ENST00000589199 287 ntBASIC0.97□□□□□ -2.25
POLR1AO95602 MTND4P12-201ENST00000498999 1377 ntBASIC0.97□□□□□ -2.25
POLR1AO95602 ZNF702P-202ENST00000434269 1966 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
POLR1AO95602 SNORA23-201ENST00000365128 182 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 MIR146A-201ENST00000385201 99 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 MIR934-201ENST00000401241 83 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 AL513475.1-201ENST00000406602 315 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 AC006548.1-201ENST00000427470 102 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 RPL23AP6-201ENST00000446637 472 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 RPS15AP27-201ENST00000449183 343 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 DYNLL1P5-201ENST00000467158 270 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
POLR1AO95602 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.96□□□□□ -2.26
POLR1AO95602 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.96□□□□□ -2.26
POLR1AO95602 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.96□□□□□ -2.26
POLR1AO95602 SNORD14A-201ENST00000606526 91 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 AC135507.1-201ENST00000607214 561 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 CR381572.1-201ENST00000625098 102 ntBASIC0.96□□□□□ -2.26
POLR1AO95602 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.95□□□□□ -2.26
POLR1AO95602 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.95□□□□□ -2.26
POLR1AO95602 snoU13.7-201ENST00000459220 104 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 RPS27P23-201ENST00000487608 251 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.95□□□□□ -2.26
POLR1AO95602 RNU7-193P-201ENST00000516723 65 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 AC104997.1-201ENST00000519761 717 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 AC118273.2-201ENST00000532092 465 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.95□□□□□ -2.26
POLR1AO95602 AC008555.8-201ENST00000623602 2168 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 AC099548.1-201ENST00000421443 426 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 HMGB1P9-201ENST00000429856 646 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 AC245047.4-201ENST00000433189 144 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 AL161651.1-201ENST00000440882 223 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 SNORA48.11-201ENST00000517015 89 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 AP005902.1-201ENST00000521358 186 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.95□□□□□ -2.26
POLR1AO95602 AP005639.2-201ENST00000527592 928 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 CYCSP2-201ENST00000558168 301 ntBASIC0.95□□□□□ -2.26
POLR1AO95602 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
POLR1AO95602 ELL2P3-201ENST00000457883 1602 ntBASIC0.94□□□□□ -2.26
POLR1AO95602 U3.20-201ENST00000390909 217 ntBASIC0.94□□□□□ -2.26
POLR1AO95602 SEPT2P1-201ENST00000419651 180 ntBASIC0.94□□□□□ -2.26
POLR1AO95602 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.94□□□□□ -2.26
POLR1AO95602 MTATP6P7-201ENST00000453315 681 ntBASIC0.94□□□□□ -2.26
POLR1AO95602 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.94□□□□□ -2.26
POLR1AO95602 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.94□□□□□ -2.26
POLR1AO95602 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
POLR1AO95602 MIR767-201ENST00000390228 109 ntBASIC0.93□□□□□ -2.26
POLR1AO95602 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.93□□□□□ -2.26
POLR1AO95602 AC098591.2-201ENST00000510152 315 ntBASIC0.93□□□□□ -2.26
POLR1AO95602 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.93□□□□□ -2.26
POLR1AO95602 SNRPGP16-201ENST00000533275 226 ntBASIC0.93□□□□□ -2.26
POLR1AO95602 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.93□□□□□ -2.26
POLR1AO95602 AC138473.1-201ENST00000605717 526 ntBASIC0.93□□□□□ -2.26
POLR1AO95602 AC008945.2-201ENST00000606056 604 ntBASIC0.93□□□□□ -2.26
POLR1AO95602 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
POLR1AO95602 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
POLR1AO95602 SNORA22-201ENST00000383907 134 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 SNORA22C-201ENST00000384614 134 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 RNU6-837P-201ENST00000391056 108 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 snoU13.28-201ENST00000459235 104 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.92□□□□□ -2.26
POLR1AO95602 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.92□□□□□ -2.26
POLR1AO95602 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.92□□□□□ -2.26
POLR1AO95602 AC115085.1-201ENST00000588924 229 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 AC023932.2-201ENST00000603176 175 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 AL450336.1-201ENST00000605180 586 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 AC067863.3-201ENST00000624172 122 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 MIR6086-201ENST00000638065 55 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 RNU6-666P-201ENST00000363499 107 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
POLR1AO95602 BTF3L4P2-201ENST00000392798 346 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 RN7SKP158-201ENST00000410453 326 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.92□□□□□ -2.26
POLR1AO95602 RPL31P35-201ENST00000431058 377 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 AC018437.1-201ENST00000492214 406 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.92□□□□□ -2.26
POLR1AO95602 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.92□□□□□ -2.26
POLR1AO95602 LRRC34P2-201ENST00000514850 553 ntBASIC0.92□□□□□ -2.26
POLR1AO95602 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms