Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.25□□□□□ -2.37
USH2AO75445 RNU6ATAC39P-201ENST00000516309 149 ntBASIC0.25□□□□□ -2.37
USH2AO75445 RNU6-229P-201ENST00000516614 102 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.25□□□□□ -2.37
USH2AO75445 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.25□□□□□ -2.37
USH2AO75445 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.25□□□□□ -2.37
USH2AO75445 MIR6866-201ENST00000638146 69 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AC099654.7-201ENST00000635788 2127 ntBASIC0.25□□□□□ -2.37
USH2AO75445 MIR214-201ENST00000385214 110 ntBASIC0.25□□□□□ -2.37
USH2AO75445 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.25□□□□□ -2.37
USH2AO75445 AC244453.4-201ENST00000419150 388 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AC246680.2-201ENST00000422106 389 ntBASIC0.25□□□□□ -2.37
USH2AO75445 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
USH2AO75445 AC079780.1-201ENST00000428259 207 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AL627224.1-201ENST00000448334 444 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.25□□□□□ -2.37
USH2AO75445 SSXP4-201ENST00000451349 245 ntBASIC0.25□□□□□ -2.37
USH2AO75445 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.25□□□□□ -2.37
USH2AO75445 AL121769.1-201ENST00000469473 401 ntBASIC0.25□□□□□ -2.37
USH2AO75445 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.25□□□□□ -2.37
USH2AO75445 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
USH2AO75445 AC025768.1-201ENST00000510057 267 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.25□□□□□ -2.37
USH2AO75445 SNORD84-203ENST00000584275 78 ntBASIC0.25□□□□□ -2.37
USH2AO75445 DUXAP3-201ENST00000603616 594 ntBASIC0.25□□□□□ -2.37
USH2AO75445 RPL31P52-201ENST00000407532 367 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.25□□□□□ -2.37
USH2AO75445 SNRPFP2-201ENST00000440710 251 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.25□□□□□ -2.37
USH2AO75445 AC112206.3-201ENST00000514578 389 ntBASIC0.25□□□□□ -2.37
USH2AO75445 RNU6-711P-201ENST00000517255 106 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.25□□□□□ -2.37
USH2AO75445 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.25□□□□□ -2.37
USH2AO75445 AC008269.2-201ENST00000561915 1105 ntBASIC0.25□□□□□ -2.37
USH2AO75445 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.25□□□□□ -2.37
USH2AO75445 AP002784.2-201ENST00000397300 549 ntBASIC0.25□□□□□ -2.37
USH2AO75445 SNORD108-201ENST00000459332 71 ntBASIC0.25□□□□□ -2.37
USH2AO75445 RPL39P28-201ENST00000465655 155 ntBASIC0.25□□□□□ -2.37
USH2AO75445 HMGN2P9-201ENST00000476875 229 ntBASIC0.25□□□□□ -2.37
USH2AO75445 RPL30P14-201ENST00000482744 348 ntBASIC0.25□□□□□ -2.37
USH2AO75445 LSM6P2-201ENST00000552208 177 ntBASIC0.25□□□□□ -2.37
USH2AO75445 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.25□□□□□ -2.37
USH2AO75445 AC009974.1-201ENST00000608881 455 ntBASIC0.25□□□□□ -2.37
USH2AO75445 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.24□□□□□ -2.37
USH2AO75445 RSL24D1P8-201ENST00000434442 492 ntBASIC0.24□□□□□ -2.37
USH2AO75445 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.24□□□□□ -2.37
USH2AO75445 SNRPEP4-201ENST00000435815 279 ntBASIC0.24□□□□□ -2.37
USH2AO75445 RPS27AP8-201ENST00000452665 445 ntBASIC0.24□□□□□ -2.37
USH2AO75445 RPL31P60-201ENST00000478450 367 ntBASIC0.24□□□□□ -2.37
USH2AO75445 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.24□□□□□ -2.37
USH2AO75445 RNU6-989P-201ENST00000362756 107 ntBASIC0.24□□□□□ -2.37
USH2AO75445 RNU6-1104P-201ENST00000384723 104 ntBASIC0.24□□□□□ -2.37
USH2AO75445 AC010099.3-201ENST00000423896 409 ntBASIC0.24□□□□□ -2.37
USH2AO75445 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.24□□□□□ -2.37
USH2AO75445 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
USH2AO75445 SDR42E1P2-201ENST00000614861 481 ntBASIC0.24□□□□□ -2.37
USH2AO75445 SDR42E1P4-201ENST00000620894 481 ntBASIC0.24□□□□□ -2.37
USH2AO75445 AP003122.6-201ENST00000623831 495 ntBASIC0.24□□□□□ -2.37
USH2AO75445 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.24□□□□□ -2.37
USH2AO75445 MIR627-201ENST00000384979 97 ntBASIC0.24□□□□□ -2.37
USH2AO75445 AL590556.1-201ENST00000423231 483 ntBASIC0.24□□□□□ -2.37
USH2AO75445 snoU13.21-201ENST00000459368 105 ntBASIC0.24□□□□□ -2.37
USH2AO75445 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.24□□□□□ -2.37
USH2AO75445 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.24□□□□□ -2.37
USH2AO75445 AF279873.1-201ENST00000523393 313 ntBASIC0.24□□□□□ -2.37
USH2AO75445 AL138976.2-201ENST00000563989 694 ntBASIC0.24□□□□□ -2.37
USH2AO75445 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.24□□□□□ -2.37
USH2AO75445 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.24□□□□□ -2.37
USH2AO75445 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.24□□□□□ -2.37
USH2AO75445 SNORA63.3-201ENST00000362682 132 ntBASIC0.24□□□□□ -2.37
USH2AO75445 MTCO1P56-201ENST00000401674 224 ntBASIC0.24□□□□□ -2.37
USH2AO75445 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
USH2AO75445 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.24□□□□□ -2.37
USH2AO75445 AC090142.3-201ENST00000519012 385 ntBASIC0.24□□□□□ -2.37
USH2AO75445 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.24□□□□□ -2.37
USH2AO75445 OR5AL2P-201ENST00000532185 920 ntBASIC0.24□□□□□ -2.37
USH2AO75445 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.24□□□□□ -2.37
USH2AO75445 AL160236.1-201ENST00000556317 195 ntBASIC0.24□□□□□ -2.37
USH2AO75445 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.24□□□□□ -2.37
USH2AO75445 Y_RNA.146-201ENST00000363549 102 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC093155.1-201ENST00000440164 826 ntBASIC0.23□□□□□ -2.37
USH2AO75445 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
USH2AO75445 RPS27P26-201ENST00000494583 239 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC025465.4-201ENST00000513422 638 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC103810.9-201ENST00000606688 112 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC090116.1-201ENST00000615679 446 ntBASIC0.23□□□□□ -2.37
USH2AO75445 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
USH2AO75445 Y_RNA.403-201ENST00000383977 101 ntBASIC0.23□□□□□ -2.37
USH2AO75445 RNY3P5-201ENST00000384127 102 ntBASIC0.23□□□□□ -2.37
USH2AO75445 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.23□□□□□ -2.37
USH2AO75445 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.23□□□□□ -2.37
USH2AO75445 MTND4P6-201ENST00000438297 472 ntBASIC0.23□□□□□ -2.37
USH2AO75445 PABPC1P3-201ENST00000469174 459 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.23□□□□□ -2.37
USH2AO75445 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.23□□□□□ -2.37
USH2AO75445 MIR4458-201ENST00000578872 75 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC245128.3-201ENST00000594721 748 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AC013470.4-201ENST00000619978 986 ntBASIC0.23□□□□□ -2.37
USH2AO75445 AL162373.1-201ENST00000620433 407 ntBASIC0.23□□□□□ -2.37
USH2AO75445 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms