Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNX3O60493 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SNX3O60493 RNU6-778P-201ENST00000363269 103 ntBASIC2.77□□□□□ -1.97
SNX3O60493 RNU6-1097P-201ENST00000363586 107 ntBASIC2.77□□□□□ -1.97
SNX3O60493 SNORA9.2-201ENST00000365361 133 ntBASIC2.77□□□□□ -1.97
SNX3O60493 RNU6-61P-201ENST00000365528 109 ntBASIC2.77□□□□□ -1.97
SNX3O60493 SNORA4.3-201ENST00000365564 137 ntBASIC2.77□□□□□ -1.97
SNX3O60493 DEFA7P-201ENST00000382676 285 ntBASIC2.77□□□□□ -1.97
SNX3O60493 SNORA54-201ENST00000384281 123 ntBASIC2.77□□□□□ -1.97
SNX3O60493 Y_RNA.582-201ENST00000391023 95 ntBASIC2.77□□□□□ -1.97
SNX3O60493 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.77□□□□□ -1.97
SNX3O60493 SKA2P1-201ENST00000425592 390 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX3O60493 RPS15AP9-201ENST00000439856 381 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX3O60493 MTCO2P7-201ENST00000446518 666 ntBASIC2.77□□□□□ -1.97
SNX3O60493 Z75741.1-201ENST00000446793 314 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AL133547.1-201ENST00000448546 220 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC027673.1-201ENST00000456245 405 ntBASIC2.77□□□□□ -1.97
SNX3O60493 RNU7-23P-201ENST00000459465 62 ntBASIC2.77□□□□□ -1.97
SNX3O60493 RPS3AP17-201ENST00000472594 777 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AL358832.1-201ENST00000497800 389 ntBASIC2.77□□□□□ -1.97
SNX3O60493 HSPD1P15-201ENST00000505573 1122 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX3O60493 RNU6-143P-201ENST00000516942 93 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX3O60493 AP003392.2-201ENST00000527269 208 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.77□□□□□ -1.97
SNX3O60493 H3F3AP1-201ENST00000559984 334 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AGGF1P4-201ENST00000568249 801 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX3O60493 AL158032.1-201ENST00000605401 106 ntBASIC2.77□□□□□ -1.97
SNX3O60493 NDUFA8P1-201ENST00000605525 367 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AL139286.2-201ENST00000606838 396 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC104073.3-201ENST00000610942 955 ntBASIC2.77□□□□□ -1.97
SNX3O60493 DUSP12P1-201ENST00000612874 516 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC012409.4-201ENST00000612923 249 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC011939.3-201ENST00000613686 466 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC025034.2-201ENST00000623264 286 ntBASIC2.77□□□□□ -1.97
SNX3O60493 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.77□□□□□ -1.97
SNX3O60493 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SNX3O60493 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.77□□□□□ -1.97
SNX3O60493 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNX3O60493 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX3O60493 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX3O60493 MIR6073-201ENST00000352083 89 ntBASIC2.76□□□□□ -1.97
SNX3O60493 MIR26A1-201ENST00000362205 77 ntBASIC2.76□□□□□ -1.97
SNX3O60493 RNU6-179P-201ENST00000363350 107 ntBASIC2.76□□□□□ -1.97
SNX3O60493 RNU1-33P-201ENST00000364249 162 ntBASIC2.76□□□□□ -1.97
SNX3O60493 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SNX3O60493 RNU2-16P-201ENST00000410712 136 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX3O60493 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX3O60493 AL365496.1-201ENST00000426885 215 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AL589823.1-201ENST00000429577 183 ntBASIC2.76□□□□□ -1.97
SNX3O60493 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SNX3O60493 AC018644.1-201ENST00000429934 551 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX3O60493 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX3O60493 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX3O60493 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.76□□□□□ -1.97
SNX3O60493 RPL26P9-201ENST00000457466 433 ntBASIC2.76□□□□□ -1.97
SNX3O60493 MRPS17P3-201ENST00000465453 385 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AC126182.1-201ENST00000478134 357 ntBASIC2.76□□□□□ -1.97
SNX3O60493 RPS27P27-201ENST00000498779 255 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AC109927.2-201ENST00000506416 303 ntBASIC2.76□□□□□ -1.97
SNX3O60493 RBBP4P6-201ENST00000508098 202 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX3O60493 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.76□□□□□ -1.97
SNX3O60493 RNU6-123P-201ENST00000516163 102 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX3O60493 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX3O60493 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.76□□□□□ -1.97
SNX3O60493 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.76□□□□□ -1.97
SNX3O60493 SUB1P2-201ENST00000556401 297 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AL359212.1-201ENST00000556608 614 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX3O60493 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.76□□□□□ -1.97
SNX3O60493 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SNX3O60493 AL162274.2-201ENST00000614406 332 ntBASIC2.76□□□□□ -1.97
SNX3O60493 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.76□□□□□ -1.97
SNX3O60493 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AC138649.3-201ENST00000622154 254 ntBASIC2.76□□□□□ -1.97
SNX3O60493 AC009161.2-201ENST00000624626 138 ntBASIC2.76□□□□□ -1.97
SNX3O60493 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX3O60493 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNX3O60493 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNX3O60493 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.76□□□□□ -1.97
SNX3O60493 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.76□□□□□ -1.97
SNX3O60493 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.76□□□□□ -1.97
SNX3O60493 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNX3O60493 AC110774.1-201ENST00000623567 2018 ntBASIC2.75□□□□□ -1.97
SNX3O60493 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.75□□□□□ -1.97
SNX3O60493 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.75□□□□□ -1.97
SNX3O60493 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SNX3O60493 RNA5SP50-201ENST00000363731 107 ntBASIC2.75□□□□□ -1.97
SNX3O60493 RNU5A-6P-201ENST00000384136 116 ntBASIC2.75□□□□□ -1.97
SNX3O60493 RNU6-1042P-201ENST00000384204 107 ntBASIC2.75□□□□□ -1.97
SNX3O60493 MIR490-201ENST00000384865 128 ntBASIC2.75□□□□□ -1.97
SNX3O60493 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms