Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.84□□□□□ -1.63
GRIN3BO60391 RPL37P6-201ENST00000460682 294 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 AC010655.3-201ENST00000478818 450 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
GRIN3BO60391 RN7SKP295-201ENST00000517264 153 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 RPL21P7-201ENST00000557463 483 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.84□□□□□ -1.63
GRIN3BO60391 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.84□□□□□ -1.63
GRIN3BO60391 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.84□□□□□ -1.63
GRIN3BO60391 HMGB1P24-202ENST00000615653 685 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 ATP5A1P2-202ENST00000616464 443 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 AC091925.1-201ENST00000623204 462 ntBASIC4.84□□□□□ -1.63
GRIN3BO60391 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GRIN3BO60391 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
GRIN3BO60391 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
GRIN3BO60391 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
GRIN3BO60391 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
GRIN3BO60391 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GRIN3BO60391 Y_RNA.5-201ENST00000362334 102 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 AL139039.1-201ENST00000401900 692 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 ATP5A1P2-201ENST00000412323 255 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 RPL21P109-201ENST00000422213 475 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 RPL7P37-201ENST00000425095 738 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.83□□□□□ -1.64
GRIN3BO60391 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.83□□□□□ -1.64
GRIN3BO60391 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.83□□□□□ -1.64
GRIN3BO60391 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.83□□□□□ -1.64
GRIN3BO60391 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.83□□□□□ -1.64
GRIN3BO60391 CEACAMP4-201ENST00000457676 421 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 RPL31P60-201ENST00000478450 367 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 RNU6-840P-201ENST00000517275 65 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 AC087854.1-201ENST00000519706 414 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 ERHP1-201ENST00000523006 310 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GRIN3BO60391 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.83□□□□□ -1.64
GRIN3BO60391 EIF4BP1-201ENST00000554881 351 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.83□□□□□ -1.64
GRIN3BO60391 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.83□□□□□ -1.64
GRIN3BO60391 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.83□□□□□ -1.64
GRIN3BO60391 AC012493.2-201ENST00000595083 291 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 AC010201.1-201ENST00000605051 540 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 RNA5SP108-201ENST00000605921 117 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 MIR6715A-201ENST00000615929 79 ntBASIC4.83□□□□□ -1.64
GRIN3BO60391 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.83□□□□□ -1.64
GRIN3BO60391 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GRIN3BO60391 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
GRIN3BO60391 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.83□□□□□ -1.64
GRIN3BO60391 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GRIN3BO60391 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.82□□□□□ -1.64
GRIN3BO60391 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GRIN3BO60391 Y_RNA.148-201ENST00000363557 117 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 Y_RNA.307-201ENST00000365022 117 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 SNORA75B-201ENST00000384053 137 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 MIR1251-201ENST00000408552 70 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 AC005326.1-201ENST00000429197 123 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 MTCYBP9-201ENST00000431021 303 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 SNRPEP4-201ENST00000435815 279 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 AL359672.1-201ENST00000442302 409 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 CECR9-201ENST00000453421 199 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 AL135752.1-201ENST00000479477 471 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
GRIN3BO60391 AC021146.3-201ENST00000511911 260 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.82□□□□□ -1.64
GRIN3BO60391 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 RNU6-406P-201ENST00000516470 107 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 Y_RNA.708-201ENST00000516950 96 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 RNU6-1137P-201ENST00000517073 99 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 RNU6-323P-201ENST00000521915 107 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 AL121603.1-201ENST00000553815 142 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
GRIN3BO60391 LARP7P3-201ENST00000579888 337 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 AC233702.9-201ENST00000581528 203 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.82□□□□□ -1.64
GRIN3BO60391 MIR6128-201ENST00000615528 109 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 PLCE1P1-201ENST00000622094 305 ntBASIC4.82□□□□□ -1.64
GRIN3BO60391 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GRIN3BO60391 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GRIN3BO60391 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
GRIN3BO60391 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GRIN3BO60391 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.81□□□□□ -1.64
GRIN3BO60391 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
GRIN3BO60391 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GRIN3BO60391 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
GRIN3BO60391 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
GRIN3BO60391 AC007390.2-201ENST00000606229 3803 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
GRIN3BO60391 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GRIN3BO60391 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
GRIN3BO60391 Y_RNA.480-201ENST00000384364 102 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 RNU6-45P-201ENST00000384471 107 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
GRIN3BO60391 U3.19-201ENST00000390893 196 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 MIR548F4-201ENST00000408515 105 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
GRIN3BO60391 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.81□□□□□ -1.64
GRIN3BO60391 MTATP6P4-201ENST00000427725 675 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.81□□□□□ -1.64
GRIN3BO60391 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.81□□□□□ -1.64
GRIN3BO60391 MIR2053-201ENST00000459295 91 ntBASIC4.81□□□□□ -1.64
GRIN3BO60391 AC087884.1-201ENST00000469738 328 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms