Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL451007.1-201ENST00000595491 289 ntBASIC2.42□□□□□ -2.02
RIPK2O43353 AC021171.1-201ENST00000603137 706 ntBASIC2.42□□□□□ -2.02
RIPK2O43353 AC007619.2-201ENST00000605743 379 ntBASIC2.42□□□□□ -2.02
RIPK2O43353 AC011890.2-201ENST00000613393 294 ntBASIC2.42□□□□□ -2.02
RIPK2O43353 AC131159.1-201ENST00000621854 213 ntBASIC2.42□□□□□ -2.02
RIPK2O43353 AC120349.3-201ENST00000624377 529 ntBASIC2.42□□□□□ -2.02
RIPK2O43353 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RIPK2O43353 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.41□□□□□ -2.02
RIPK2O43353 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RIPK2O43353 Y_RNA.333-201ENST00000365274 102 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.41□□□□□ -2.02
RIPK2O43353 RNU6-19P-201ENST00000384718 107 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 MIR19A-201ENST00000384878 82 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 MIR147B-201ENST00000390185 80 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 SNORD23.1-201ENST00000408212 104 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 USP9YP6-201ENST00000413550 854 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 VPS26BP1-201ENST00000417155 755 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.41□□□□□ -2.02
RIPK2O43353 AC092447.3-201ENST00000426027 686 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AL593851.1-201ENST00000426171 157 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 FCF1P1-201ENST00000432690 571 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.41□□□□□ -2.02
RIPK2O43353 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.41□□□□□ -2.02
RIPK2O43353 MTATP6P30-201ENST00000443540 664 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 RPL23AP35-201ENST00000451906 501 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.41□□□□□ -2.02
RIPK2O43353 KLF3P2-201ENST00000465138 268 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC072039.1-201ENST00000477611 581 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC098862.1-201ENST00000504991 413 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.41□□□□□ -2.02
RIPK2O43353 RN7SKP132-201ENST00000516001 208 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 MTATP6P15-201ENST00000527233 835 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.41□□□□□ -2.02
RIPK2O43353 AL138976.2-201ENST00000563989 694 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC008751.2-201ENST00000597885 980 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC025165.5-201ENST00000602802 578 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.41□□□□□ -2.02
RIPK2O43353 AC107214.2-201ENST00000608204 634 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.41□□□□□ -2.02
RIPK2O43353 AL161423.1-201ENST00000613700 262 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC008147.4-201ENST00000617570 1204 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 U4atac.1-201ENST00000618345 95 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC024581.2-201ENST00000619986 252 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AL160394.1-201ENST00000624765 724 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.41□□□□□ -2.02
RIPK2O43353 AL109809.4-201ENST00000603520 2185 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC016717.2-201ENST00000609089 5141 ntBASIC2.41□□□□□ -2.02
RIPK2O43353 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.02
RIPK2O43353 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.4□□□□□ -2.02
RIPK2O43353 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RIPK2O43353 RNA5SP387-201ENST00000364226 106 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 SNORD114-30-201ENST00000364448 72 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 SNORA70.4-201ENST00000365509 134 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 MIR518C-201ENST00000384822 101 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 USP9YP27-201ENST00000418455 438 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 PTGES3P4-201ENST00000426243 356 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 HMGB1P27-201ENST00000431429 603 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.4□□□□□ -2.03
RIPK2O43353 MTND5P2-201ENST00000442927 1142 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.4□□□□□ -2.03
RIPK2O43353 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.4□□□□□ -2.03
RIPK2O43353 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.4□□□□□ -2.03
RIPK2O43353 SNORD109B-201ENST00000458961 67 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 SNORD109A-201ENST00000459128 67 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.4□□□□□ -2.03
RIPK2O43353 LINC00888-204ENST00000487386 421 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 RPL22P13-201ENST00000493291 347 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 SNORA70.24-201ENST00000517233 118 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AP000889.2-201ENST00000532684 490 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RIPK2O43353 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
RIPK2O43353 ELOCP32-201ENST00000548625 324 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.4□□□□□ -2.03
RIPK2O43353 AC106782.4-201ENST00000568264 210 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AC002400.1-201ENST00000569310 726 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AC136618.2-201ENST00000575091 400 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 ISCA1P3-201ENST00000577104 373 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.4□□□□□ -2.03
RIPK2O43353 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.4□□□□□ -2.03
RIPK2O43353 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.4□□□□□ -2.03
RIPK2O43353 AC007179.3-201ENST00000604976 235 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 RNU6-88P-201ENST00000606801 100 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.4□□□□□ -2.03
RIPK2O43353 AP003485.2-201ENST00000623636 610 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AC112204.3-201ENST00000623822 332 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AL356596.1-201ENST00000624230 379 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 AC007671.2-201ENST00000637344 619 ntBASIC2.4□□□□□ -2.03
RIPK2O43353 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
RIPK2O43353 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.4□□□□□ -2.03
RIPK2O43353 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.4□□□□□ -2.03
RIPK2O43353 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RIPK2O43353 NACAP2-201ENST00000318548 624 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RIPK2O43353 OR5H15-201ENST00000383696 930 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 RNU6-723P-201ENST00000383973 107 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 RNU6-658P-201ENST00000384606 106 ntBASIC2.39□□□□□ -2.03
RIPK2O43353 MIR23A-201ENST00000385245 73 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms