Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU6-193P-201ENST00000410977 107 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 RPL26P27-201ENST00000414397 437 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 ELOCP4-201ENST00000420090 333 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.59□□□□□ -1.83
NPHP1O15259 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.59□□□□□ -1.83
NPHP1O15259 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NPHP1O15259 HMGB1P9-201ENST00000429856 646 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 RPS12P18-201ENST00000442381 270 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 AL022238.1-201ENST00000442557 355 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 RN7SL75P-201ENST00000461926 281 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 AC007182.2-201ENST00000489251 402 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 SCARNA20.6-201ENST00000517251 106 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 HMGB1P41-201ENST00000520234 440 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.59□□□□□ -1.83
NPHP1O15259 BNIP3P9-201ENST00000603714 553 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 AC008250.2-201ENST00000615261 205 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.59□□□□□ -1.83
NPHP1O15259 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NPHP1O15259 AC110491.1-201ENST00000562191 2010 ntBASIC3.59□□□□□ -1.83
NPHP1O15259 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.59□□□□□ -1.84
NPHP1O15259 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.58□□□□□ -1.84
NPHP1O15259 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP1O15259 U3.6-201ENST00000363622 211 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 SNORA40.3-201ENST00000390964 122 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.58□□□□□ -1.84
NPHP1O15259 AC098614.2-201ENST00000426040 255 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.58□□□□□ -1.84
NPHP1O15259 SETP8-201ENST00000435341 628 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 AC104850.1-201ENST00000435940 476 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP1O15259 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.58□□□□□ -1.84
NPHP1O15259 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.58□□□□□ -1.84
NPHP1O15259 RNU6-677P-201ENST00000516914 101 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 RNA5SP380-201ENST00000517190 98 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.58□□□□□ -1.84
NPHP1O15259 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.58□□□□□ -1.84
NPHP1O15259 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.58□□□□□ -1.84
NPHP1O15259 RPL23AP78-201ENST00000599928 470 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 AC131902.3-201ENST00000611767 581 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 MIR3974-201ENST00000637126 96 ntBASIC3.58□□□□□ -1.84
NPHP1O15259 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.58□□□□□ -1.84
NPHP1O15259 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.58□□□□□ -1.84
NPHP1O15259 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NPHP1O15259 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.58□□□□□ -1.84
NPHP1O15259 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPHP1O15259 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
NPHP1O15259 MIR34A-201ENST00000385130 110 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 RPS3AP36-201ENST00000398190 775 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 RNU2-49P-201ENST00000410666 184 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AC009518.2-201ENST00000418056 731 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AL591212.2-201ENST00000433923 257 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.57□□□□□ -1.84
NPHP1O15259 ST13P20-201ENST00000447996 1065 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AL033528.1-201ENST00000453780 140 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 snoU109.1-201ENST00000459339 135 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 SNORD42A-201ENST00000459584 64 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 RPL31P41-201ENST00000477967 372 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AC139453.3-201ENST00000493276 369 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPHP1O15259 AC113155.1-201ENST00000511141 769 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AC010486.3-201ENST00000511602 785 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NPHP1O15259 RNU6-703P-201ENST00000516946 107 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AC022616.3-201ENST00000523940 148 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.57□□□□□ -1.84
NPHP1O15259 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.57□□□□□ -1.84
NPHP1O15259 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.57□□□□□ -1.84
NPHP1O15259 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.57□□□□□ -1.84
NPHP1O15259 AC005771.1-201ENST00000585581 349 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AC005498.1-201ENST00000592125 465 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 CLIC4P2-201ENST00000601934 717 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AC174048.1-201ENST00000603389 144 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AL590229.1-201ENST00000603497 542 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AL355877.2-201ENST00000603670 358 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AC022893.3-201ENST00000607665 437 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
NPHP1O15259 AC022079.1-201ENST00000621546 602 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AC090617.7-201ENST00000623952 126 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 AC092608.2-201ENST00000624427 218 ntBASIC3.57□□□□□ -1.84
NPHP1O15259 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.57□□□□□ -1.84
NPHP1O15259 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
NPHP1O15259 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
NPHP1O15259 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.56□□□□□ -1.84
NPHP1O15259 AC073343.1-201ENST00000328239 651 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 RNY4P34-201ENST00000364779 95 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NPHP1O15259 Y_RNA.534-201ENST00000384599 112 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 RNU6-297P-201ENST00000384636 107 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 RNY3P9-201ENST00000384727 106 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NPHP1O15259 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP1O15259 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.56□□□□□ -1.84
NPHP1O15259 NDUFB4P5-201ENST00000415445 361 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AC092809.3-201ENST00000415453 231 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AC090960.1-201ENST00000421072 306 ntBASIC3.56□□□□□ -1.84
NPHP1O15259 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.56□□□□□ -1.84
NPHP1O15259 RPS24P1-201ENST00000438550 371 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms