Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXN3O00409 FER-210ENST00000628534 558 ntTSL 5 BASIC3.74□□□□□ -1.81
FOXN3O00409 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.74□□□□□ -1.81
FOXN3O00409 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
FOXN3O00409 ASNSP3-201ENST00000451989 1306 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXN3O00409 SNORA4.3-201ENST00000365564 137 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 MIR134-201ENST00000385258 73 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 RN7SKP285-201ENST00000410137 318 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 RNU6-908P-201ENST00000410160 94 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 RNU2-29P-201ENST00000410423 189 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.73□□□□□ -1.81
FOXN3O00409 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FOXN3O00409 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXN3O00409 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
FOXN3O00409 RPL23AP69-201ENST00000431134 458 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 SNRPEP4-201ENST00000435815 279 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 MTCO3P18-201ENST00000440206 761 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXN3O00409 SNORD105B-201ENST00000458770 79 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXN3O00409 SUMO2P6-201ENST00000505273 288 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXN3O00409 AC114786.4-201ENST00000508771 728 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 AC098591.2-201ENST00000510152 315 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXN3O00409 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXN3O00409 AC104619.4-201ENST00000510773 249 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 RN7SKP18-201ENST00000516005 275 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 RNU6-875P-201ENST00000516488 106 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 RNU6-1231P-201ENST00000517185 103 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 RNU6-711P-201ENST00000517255 106 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 NDUFB9P3-201ENST00000521269 501 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 AC093331.1-201ENST00000521474 169 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 AP005435.4-201ENST00000529514 284 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 RAB11AP2-201ENST00000545905 639 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXN3O00409 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXN3O00409 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXN3O00409 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXN3O00409 MIR5583-1-201ENST00000580941 59 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXN3O00409 AL035413.2-201ENST00000604801 525 ntBASIC3.73□□□□□ -1.81
FOXN3O00409 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXN3O00409 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.73□□□□□ -1.81
FOXN3O00409 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.73□□□□□ -1.81
FOXN3O00409 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXN3O00409 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXN3O00409 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
FOXN3O00409 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXN3O00409 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
FOXN3O00409 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXN3O00409 AL079305.1-201ENST00000623159 3008 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXN3O00409 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
FOXN3O00409 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
FOXN3O00409 SNORA5A-201ENST00000384111 134 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 RN7SKP202-201ENST00000410439 330 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 RNU4-46P-201ENST00000410818 138 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 OR9R1P-201ENST00000412200 877 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 AC063979.1-201ENST00000415539 377 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXN3O00409 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXN3O00409 AP000907.1-201ENST00000428428 510 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 CYCSP4-201ENST00000429682 331 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXN3O00409 HMGB3P11-201ENST00000440127 604 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXN3O00409 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXN3O00409 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXN3O00409 TRBV1-201ENST00000476502 284 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXN3O00409 SNORA70.19-201ENST00000516717 90 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 SNORD59.2-201ENST00000516873 68 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 MIR2276-201ENST00000516886 89 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 RNU6-685P-201ENST00000517088 95 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 BNIP3P6-201ENST00000549284 499 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 AC106782.4-201ENST00000568264 210 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXN3O00409 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXN3O00409 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 MIR6076-201ENST00000617521 113 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 uc_338.11-201ENST00000619132 160 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 AC073308.1-201ENST00000623696 305 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 AC099654.10-201ENST00000640395 161 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 AC009093.8-201ENST00000641769 292 ntBASIC3.72□□□□□ -1.81
FOXN3O00409 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
FOXN3O00409 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXN3O00409 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXN3O00409 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.71□□□□□ -1.81
FOXN3O00409 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
FOXN3O00409 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN3O00409 RIOK3P1-201ENST00000418778 1528 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN3O00409 FTLP6-201ENST00000355274 422 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 RNU4-66P-201ENST00000365199 138 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 RNU1-64P-201ENST00000365443 163 ntBASIC3.71□□□□□ -1.82
FOXN3O00409 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN3O00409 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms