Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 AC138627.2-201ENST00000624202 601 ntBASIC5.03□□□□□ -1.6
TNFRSF11AQ9Y6Q6 AC083843.2-201ENST00000568248 6253 ntBASIC5.03□□□□□ -1.6
TNFRSF11AQ9Y6Q6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TNFRSF11AQ9Y6Q6 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TNFRSF11AQ9Y6Q6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 MARK2P15-201ENST00000432204 2186 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 Y_RNA.14-201ENST00000362415 103 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 Y_RNA.214-201ENST00000364201 112 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RNU6-1062P-201ENST00000383908 107 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 Y_RNA.512-201ENST00000384518 102 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 PPIAP31-201ENST00000405422 495 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AL158071.1-201ENST00000430315 461 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RPS3AP12-201ENST00000443616 753 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AL360271.2-201ENST00000447710 161 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RNU6-1037P-201ENST00000459571 107 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AL132838.2-201ENST00000492041 314 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC025554.1-201ENST00000505641 188 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC105758.1-201ENST00000506038 399 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 SNORA40.15-201ENST00000516884 107 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RNU6-143P-201ENST00000516942 93 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC026470.2-201ENST00000561492 181 ntBASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 Y_RNA.117-201ENST00000363294 101 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RNU6-770P-201ENST00000363929 105 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 USP9YP7-201ENST00000436723 430 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AL162151.2-201ENST00000448875 158 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 USP9YP32-201ENST00000452432 430 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 APOOP4-201ENST00000513530 597 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 SNORA31.22-201ENST00000517204 135 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC091144.1-201ENST00000519573 138 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 MIR1273C-201ENST00000578669 77 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RPS29P30-201ENST00000600975 111 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC006023.2-201ENST00000609916 167 ntBASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TNFRSF11AQ9Y6Q6 MUC2-202ENST00000613187 4845 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RNU6-1303P-201ENST00000364841 107 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 Y_RNA.324-201ENST00000365165 102 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RNU6-356P-201ENST00000384140 107 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RNU4-78P-201ENST00000410940 126 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AL513331.1-201ENST00000411908 397 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC063979.1-201ENST00000415539 377 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 EIF4EP2-201ENST00000422816 654 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 RPL21P2-201ENST00000440049 481 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 MTND3P25-201ENST00000509243 135 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 HMGB3P26-201ENST00000560051 582 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC106785.1-201ENST00000565935 262 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC233702.9-201ENST00000581528 203 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 VN1R85P-201ENST00000601587 426 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 AC023043.4-201ENST00000612081 449 ntBASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
TNFRSF11AQ9Y6Q6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFRSF11AQ9Y6Q6 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFRSF11AQ9Y6Q6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms