Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL513185.2-201ENST00000425543 193 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 GMFBP1-201ENST00000467831 427 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AC004062.1-201ENST00000509926 645 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 LRRC34P2-201ENST00000514850 553 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 SNORA20.3-201ENST00000516880 132 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 NRON-201ENST00000517270 370 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AP001029.3-201ENST00000588063 596 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AL162713.1-201ENST00000604480 262 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AL033523.1-201ENST00000605153 153 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 uc_338.11-201ENST00000619132 160 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AC138649.5-201ENST00000637456 137 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AC024614.3-201ENST00000637860 256 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 Z83843.1-201ENST00000604070 3685 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 MTND4P14-201ENST00000435799 1354 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 MTND4P12-201ENST00000498999 1377 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 AC118273.1-201ENST00000525324 3006 ntBASIC3.36□□□□□ -1.87
RAI2Q9Y5P3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RNU6-701P-201ENST00000384059 107 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RNU6-629P-201ENST00000384061 103 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AL445529.1-201ENST00000398713 389 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AL354719.1-201ENST00000406535 843 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RNU6-55P-201ENST00000411092 107 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RNU6-954P-201ENST00000411355 107 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RPL21P111-201ENST00000418453 477 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 ZNF863P-201ENST00000426746 417 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC008850.1-201ENST00000427546 362 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC093106.2-201ENST00000428212 385 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC079780.1-201ENST00000428259 207 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC098614.3-201ENST00000438957 440 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 FABP5P13-201ENST00000452144 328 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 CACYBPP2-201ENST00000453625 678 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC021205.2-201ENST00000480069 347 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RPS29P25-201ENST00000481709 171 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC008628.2-201ENST00000502605 298 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RN7SKP60-201ENST00000516985 239 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 RPL23AP84-201ENST00000571193 464 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC008945.2-201ENST00000606056 604 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 uc_338.1-201ENST00000612113 180 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC010133.1-201ENST00000615809 842 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AL353748.2-201ENST00000622148 471 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AC025034.2-201ENST00000623264 286 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 AP003122.6-201ENST00000623831 495 ntBASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.35□□□□□ -1.87
RAI2Q9Y5P3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 RNU1-70P-201ENST00000362618 164 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 RNU5A-1-201ENST00000362698 116 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
RAI2Q9Y5P3 MTCO1P39-201ENST00000426148 480 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms