Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
MRPS28Q9Y2Q9 ZNF285B-201ENST00000561698 1767 ntBASIC2.84□□□□□ -1.96
MRPS28Q9Y2Q9 AL354685.2-201ENST00000448218 1447 ntBASIC2.84□□□□□ -1.96
MRPS28Q9Y2Q9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
MRPS28Q9Y2Q9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
MRPS28Q9Y2Q9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC073343.1-201ENST00000328239 651 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 MIR449B-201ENST00000384995 97 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 MTCYBP8-201ENST00000422855 651 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 ATP5JP1-201ENST00000431631 322 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC105417.1-201ENST00000514691 285 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC022690.1-201ENST00000526681 550 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC005476.1-201ENST00000554427 397 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 OR4H12P-201ENST00000556269 907 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 LARP7P1-201ENST00000605576 316 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC008945.2-201ENST00000606056 604 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AL591516.1-201ENST00000611326 274 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC039056.2-201ENST00000622261 511 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AC091903.1-201ENST00000624322 454 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AL008636.1-201ENST00000625038 1018 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 AL034408.1-202ENST00000636088 415 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 MAPK10-322ENST00000641485 4530 ntBASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MRPS28Q9Y2Q9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 MIR148B-201ENST00000362252 99 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 RNU4-35P-201ENST00000362588 141 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 Y_RNA.279-201ENST00000364763 95 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 SNORD115-7-201ENST00000365306 82 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 RNU4-20P-201ENST00000365601 151 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 RNU6-877P-201ENST00000383868 107 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 MIR514A2-201ENST00000385131 88 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 MIR514A3-201ENST00000385132 88 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 SNORD17-201ENST00000390930 237 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 RNU6-903P-201ENST00000391270 109 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AL356776.1-201ENST00000406574 447 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 RNU6-1148P-201ENST00000410992 104 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 SRIP2-201ENST00000428470 166 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 USP12PX-201ENST00000432383 1057 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AC020550.1-201ENST00000447385 163 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AL162395.1-201ENST00000457882 422 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 RPS29P15-201ENST00000458329 171 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 KLHL2P1-201ENST00000508691 521 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AC245166.1-201ENST00000521012 253 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 HMGN1P28-201ENST00000521340 364 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 FAM60BP-201ENST00000578364 658 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AF038458.1-201ENST00000588406 262 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AC007619.2-201ENST00000605743 379 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AL355810.1-201ENST00000614629 552 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AC002076.2-201ENST00000617362 122 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 AL137003.2-201ENST00000606924 2538 ntBASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
MRPS28Q9Y2Q9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 RNU1-70P-201ENST00000362618 164 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 SNORA62.1-201ENST00000364287 154 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 RNU6-946P-201ENST00000383878 107 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 RNU6-701P-201ENST00000384059 107 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 RNU6-1029P-201ENST00000384109 107 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 MIR23B-201ENST00000384832 97 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 NDUFS5P1-201ENST00000405668 289 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 TXNP7-201ENST00000406296 293 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 RAB9AP3-201ENST00000412737 573 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 BX323014.1-201ENST00000412876 237 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 RPS29P4-201ENST00000414733 161 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 RAC1P6-201ENST00000423911 575 ntBASIC2.81□□□□□ -1.96
MRPS28Q9Y2Q9 UBE2D3P2-201ENST00000424409 445 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms