Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 EI24P1-201ENST00000416584 867 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 AC119751.6-201ENST00000416712 186 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 AL138785.1-201ENST00000425821 331 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 SDAD1P3-201ENST00000427380 333 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 MTATP6P4-201ENST00000427725 675 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 RPL26P6-201ENST00000440913 438 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 AC073587.1-201ENST00000447093 876 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 AC133134.1-201ENST00000466800 359 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 AC067942.3-201ENST00000512025 362 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 RNA5SP497-201ENST00000516081 97 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 AL160290.3-201ENST00000604869 165 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 AC091903.1-201ENST00000624322 454 ntBASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
AP4E1Q9UPM8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AL592437.2-201ENST00000421655 2434 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 MIR215-201ENST00000384858 110 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AP000275.1-201ENST00000411943 390 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 RPEP3-201ENST00000425462 676 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 RPL29P29-201ENST00000448725 423 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AC022795.1-201ENST00000473808 480 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 RN7SL817P-201ENST00000480777 288 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 RPS15AP34-201ENST00000487776 387 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 GMPSP1-201ENST00000514075 579 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 SNORA31.6-201ENST00000516241 130 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 RNA5SP471-201ENST00000516971 106 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AC008694.2-201ENST00000517591 306 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AL157871.3-201ENST00000557231 293 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AMZ2P1-203ENST00000565833 850 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 RN7SL52P-201ENST00000584271 284 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AC004792.1-201ENST00000614523 137 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 uc_338.18-201ENST00000615451 175 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 MIR6891-201ENST00000618788 93 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AP005019.3-201ENST00000620418 560 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AC007546.2-201ENST00000623996 360 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 AC006971.1-201ENST00000407916 4486 ntBASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
AP4E1Q9UPM8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AC022893.2-201ENST00000564832 3296 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RLIMP1-201ENST00000339626 1680 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 MFSD8-216ENST00000641147 4009 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 MTND5P9-201ENST00000503854 1755 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 UBE2L2-201ENST00000254302 429 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RNA5SP307-201ENST00000362863 116 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 snoU2_19.2-201ENST00000363024 80 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RN7SKP227-201ENST00000364445 330 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RNU6-700P-201ENST00000391043 107 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 SNORA74C-2-201ENST00000411179 201 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RPS20P14-201ENST00000412545 360 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AL096701.2-201ENST00000416920 238 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 USP9YP7-201ENST00000436723 430 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AC104332.1-201ENST00000440471 797 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 USP9YP32-201ENST00000452432 430 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 IFNWP4-201ENST00000453148 294 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RNU6-1037P-201ENST00000459571 107 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RPL21P126-201ENST00000470049 478 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RN7SL41P-201ENST00000476144 297 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 RPL30P10-201ENST00000488148 337 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 TRAV37-201ENST00000553906 342 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AC009314.1-201ENST00000603871 304 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 AC008962.1-201ENST00000605729 304 ntBASIC4.61□□□□□ -1.67
AP4E1Q9UPM8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms