Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
KCMF1Q9P0J7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AC018555.1-201ENST00000567548 1980 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.5-201ENST00000362334 102 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 RNU6-1115P-201ENST00000362490 106 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 SNORA37-201ENST00000384504 129 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 SNORD73A-201ENST00000386062 65 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 CYCSP33-201ENST00000414485 327 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 RPL27AP8-201ENST00000424277 446 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AC007919.1-201ENST00000429380 217 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 USP9YP30-201ENST00000430729 455 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 RPS6P12-201ENST00000432491 726 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 RPL23AP46-201ENST00000438548 490 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 RPS24P13-201ENST00000442520 397 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AL035666.1-201ENST00000446195 348 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 RNU7-187P-201ENST00000458985 68 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 PTP4A1P4-201ENST00000512479 322 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 Vault.1-201ENST00000516474 102 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AC022655.2-201ENST00000577280 318 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 OR1M4P-201ENST00000589199 287 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AC005344.1-201ENST00000613391 459 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AC008121.3-201ENST00000618726 433 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 AL732372.2-225ENST00000642124 456 ntBASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCMF1Q9P0J7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.33-201ENST00000362591 102 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.148-201ENST00000363557 117 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 RNA5SP479-201ENST00000364858 117 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 RNU6-1329P-201ENST00000365664 107 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 RNU2-3P-201ENST00000410144 191 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 Z85995.1-201ENST00000415547 335 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AL353621.1-201ENST00000418219 243 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 UBE2V1P4-201ENST00000425374 344 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 USP9YP7-201ENST00000436723 430 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 MTND3P2-201ENST00000438452 342 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC006011.1-201ENST00000442758 349 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 USP9YP32-201ENST00000452432 430 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 RN7SL585P-201ENST00000470538 280 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 HMGB1P30-201ENST00000492455 606 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.661-201ENST00000516003 99 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 RNU1-86P-201ENST00000516108 154 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 RNU6-1046P-201ENST00000516538 107 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 RNU1-107P-201ENST00000516617 154 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC007224.1-201ENST00000564410 144 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC005255.1-201ENST00000593748 216 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC007938.3-201ENST00000604965 623 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 AC083806.3-201ENST00000614016 455 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 MIR7151-201ENST00000617477 60 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 MTND5P30-201ENST00000452896 1731 ntBASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
KCMF1Q9P0J7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 AC005183.1-201ENST00000603687 1979 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.2-201ENST00000362330 96 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.151-201ENST00000363566 112 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 RNU6-1059P-201ENST00000363752 98 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 Y_RNA.324-201ENST00000365165 102 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 RNU6-395P-201ENST00000365662 106 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 RNU6-331P-201ENST00000384724 107 ntBASIC3.91□□□□□ -1.78
KCMF1Q9P0J7 SNORA75.6-201ENST00000391318 127 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms