Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 Y_RNA.295-201ENST00000364918 102 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 Y_RNA.399-201ENST00000383955 105 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 SNORA56-201ENST00000383966 129 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 RNU6-373P-201ENST00000411247 98 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 AL365496.1-201ENST00000426885 215 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC005300.1-201ENST00000428401 373 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 PRPS1P1-201ENST00000445305 876 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 RPS15AP27-201ENST00000449183 343 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC009901.1-201ENST00000506703 541 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 RNA5SP208-201ENST00000516156 78 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 MIR892C-201ENST00000516410 77 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX56Q9NY93 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 AL133241.1-201ENST00000556832 487 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 AL138976.2-201ENST00000563989 694 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 MIR4424-201ENST00000585257 86 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC012119.1-201ENST00000603184 222 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC087045.1-201ENST00000605856 382 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 AC104458.1-201ENST00000608243 463 ntBASIC3.95□□□□□ -1.78
DDX56Q9NY93 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX56Q9NY93 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
DDX56Q9NY93 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
DDX56Q9NY93 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX56Q9NY93 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC126755.2-208ENST00000327792 462 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC138969.1-213ENST00000331436 462 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 RNU6-82P-201ENST00000363970 107 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 RNU6-1068P-201ENST00000410958 103 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 AL669831.1-202ENST00000428504 417 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 GTF2IP13-201ENST00000438487 386 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 H2AFZP6-201ENST00000444403 394 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 HMGN2P10-201ENST00000448085 265 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC004801.2-202ENST00000463559 283 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX56Q9NY93 MTND4LP22-201ENST00000508209 276 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 RNU2-69P-201ENST00000516061 100 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 IGHV3-76-201ENST00000522465 295 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX56Q9NY93 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX56Q9NY93 AL451007.1-201ENST00000595491 289 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 SNORA62.6-201ENST00000606322 83 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 AC107294.3-201ENST00000609211 526 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 AL356321.1-201ENST00000621360 228 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DDX56Q9NY93 OR4G1P-203ENST00000641984 1631 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 GABRG2-229ENST00000641017 3628 ntBASIC3.94□□□□□ -1.78
DDX56Q9NY93 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
DDX56Q9NY93 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DDX56Q9NY93 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
DDX56Q9NY93 Y_RNA.38-201ENST00000362617 102 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 RNU6-213P-201ENST00000384051 104 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 RNA5SP424-201ENST00000390988 115 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 SAR1AP2-201ENST00000392696 594 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 RAP1BP3-201ENST00000407180 549 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 RNA5SP118-201ENST00000410385 109 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 RNU6-607P-201ENST00000411283 108 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 RHEBP3-201ENST00000411920 351 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 AC009237.5-201ENST00000414271 501 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 AC096649.2-201ENST00000416186 393 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.93□□□□□ -1.78
DDX56Q9NY93 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.93□□□□□ -1.78
DDX56Q9NY93 NIPA2P5-201ENST00000452282 464 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.93□□□□□ -1.78
DDX56Q9NY93 RPL21P99-201ENST00000480369 423 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 AC093663.1-201ENST00000497190 394 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX56Q9NY93 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX56Q9NY93 AC022695.1-201ENST00000522089 237 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.93□□□□□ -1.78
DDX56Q9NY93 AC021739.1-201ENST00000559631 174 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 CYCSP39-201ENST00000565821 309 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 MIR5047-201ENST00000579212 100 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 RMST_4.1-201ENST00000616886 107 ntBASIC3.93□□□□□ -1.78
DDX56Q9NY93 AP003400.5-201ENST00000624827 617 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 261.8 ms